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Area of Science:

  • Open-source software (OSS) in cancer research informatics.
  • Sustainability of research software.

Background:

  • The National Cancer Institute's Informatics Technology for Cancer Research (ITCR) program funds open-source software (OSS) for cancer research.
  • Ensuring the long-term sustainability of ITCR-funded OSS is a growing challenge.
  • The ITCR Sustainability and Industry Partnership Working Group (SIP-WG) was formed in 2019 to address this challenge.

Purpose of the Study:

  • To investigate options for enhancing the long-term sustainability of ITCR-funded OSS.
  • To develop business model archetypes for ITCR OSS sustainability plans.
  • To assemble sustainability models from various sources, including ITCR programs, other studies, and external organizations.

Main Methods:

  • Reviewing existing OSS sustainability models.
  • Describing 10 diverse OSS use cases (e.g., 3D Slicer, Bioconductor, Cytoscape, R, REDCap).
  • Evaluating these use cases across 10 sustainability aspects: governance, documentation, code quality, support, ecosystem collaboration, security, legal, finance, marketing, and dependency hygiene.

Main Results:

  • All 10 reviewed OSS demonstrate effective governance, documentation, code quality, dependency hygiene, user/developer support, and marketing.
  • A variety of licensing (e.g., GPL, BSD, Apache) and financial models (e.g., federal funding, industry support, commercial) are employed.
  • Detailed public information on ecosystem collaboration and security is often lacking.

Conclusions:

  • Recommended essential attributes for research software include alignment with scientific needs, a dedicated team, a strong user community, feasible licensing and financial models, and effective product management.
  • Future ITCR activities should focus on discussing sustainability and licensing models.
  • Key actions include establishing a central library and allocating resources for code quality, ecosystem collaboration, security, and dependency hygiene.