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AudioChip: A Deep Phenotyping Approach for Deconstructing and Quantifying Audiological Phenotypes of Self-Reported
Ishan Sunilkumar Bhatt1, Raquel Dias2, Nathan Wineinger2
1Department of Communication Sciences & Disorders, University of Iowa, Iowa City, Iowa, USA.
This study introduces AudioChipping, a deep phenotyping method for complex hearing phenotypes. It reveals links between speech perception difficulties and auditory brainstem function in normal-hearing individuals.
Area of Science:
- Audiology
- Genetics
- Neuroscience
Background:
- 15% of US adults report speech perception issues despite normal hearing tests.
- Genetic factors may influence speech perception difficulties.
- Deep phenotyping is needed to understand complex audiometric phenotypes.
Purpose of the Study:
- To describe AudioChipping, a deep phenotyping method.
- To deconstruct and quantify complex audiometric phenotypes.
- To explore genotype-phenotype relationships in hearing.
Main Methods:
- Evaluated 70 young females with normal audiograms using behavioral thresholds, otoacoustic emissions, and auditory brainstem responses (ABR).
- Assessed speech perception with the Speech, Spatial, and Quality of Hearing Scale (SSQ).
- Employed multiple linear regression and k-means clustering to develop the AudioChip phenotype.
Main Results:
- SSQ scores negatively correlated with noise exposure.
- ABR wave I amplitude, cABR offset latency, and loudness discomfort level predicted SSQ scores, explaining 18% of variance.
- K-means clustering identified subgroups, with 53% of participants showing low SSQ scores.
Conclusions:
- AudioChip effectively delineates audiometric heterogeneity in individuals with varying SSQ scores.
- Highlights the link between SSQ and auditory coding precision in the auditory brainstem.
- AudioChip can aid in genotype-phenotype analysis and longitudinal auditory studies.
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