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Published on: June 16, 2021
Gestational Age Dependence of the Maternal Circulating Long Non-Coding RNA Transcriptome During Normal Pregnancy
Erica L Kleinbrink1, Nardhy Gomez-Lopez2,3,4, Donghong Ju1
1Center for Molecular Medicine and Genetics, Wayne State University, Detroit, MI, United States.
Researchers characterized the non-coding transcriptome in maternal blood during normal pregnancy. They identified differentially expressed long non-coding RNAs (lncRNAs), pseudogenes, and other non-coding RNAs, revealing insights into pregnancy regulation.
Area of Science:
- Genomics
- Molecular Biology
- Obstetrics
Background:
- The human genome contains a vast non-coding transcriptome, primarily long non-coding RNAs (lncRNAs).
- The role of the non-coding transcriptome during normal pregnancy is largely unknown.
- Previous studies characterized the protein-coding transcriptome during pregnancy.
Purpose of the Study:
- To characterize the longitudinal changes in the non-coding transcriptome of maternal whole blood during normal pregnancy.
- To identify specific non-coding RNAs (ncRNAs) that are differentially expressed with advancing gestation.
- To explore the potential functions of these ncRNAs in pregnancy.
Main Methods:
- Analysis of maternal whole blood samples collected longitudinally throughout normal pregnancy.
- Genome-scale annotation and characterization of the non-coding transcriptome.
- Validation of differentially expressed ncRNAs, including long non-coding RNAs (lncRNAs), pseudogenes, microRNAs, and small nucleolar RNAs (snoRNAs).
Main Results:
- Identified nine differentially expressed lncRNAs, including lincRNAs and antisense lncRNAs.
- Discovered six differentially expressed transcribed pseudogenes.
- Found three other modulated non-coding RNAs: a microRNA (MIR4439), a small nucleolar RNA (SNORD41), and a small Cajal-body specific ncRNA (SCARNA2).
- Expression profiles suggested diverse functions related to pregnancy.
Conclusions:
- The non-coding transcriptome undergoes significant time-dependent changes during normal pregnancy.
- These findings provide a foundation for understanding lncRNA-mediated regulatory pathways at the maternal-fetal interface.
- This research deepens the molecular understanding of pregnancy and its impact on maternal and fetal health.
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