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Updated: Oct 10, 2025

Visualizing Mitophagy with Fluorescent Dyes for Mitochondria and Lysosome
Published on: November 30, 2022
Visualization of mitophagy using LysoKK, a 7-nitro-2,1,3-benzoxadiazole-(arylpropyl)benzylamine derivative
Hiroshi Takemori1, Kenichi Koga1, Kyoka Kawaguchi1
1Department of Chemistry and Biomolecular Science, Faculty of Engineering, Gifu University, 1-1 Yanagido, Gifu 501-1193, Japan.
Abstract:
7-Nitro-2,1,3-benzoxadiazole (NBD) is an environmentally responsive fluorophore. We have reported that GIF2114 and GIF2115, anti-ferroptotic N,N-dimethylaniline-compounds, localize to lysosome when they are visualized by NBD. Here we show that the NBD fluorescence of GIF2259, a hybrid derivative of GIF2114 and GIF2115, was quenched in aqueous buffer. However, the fluorescence was recovered when GIF2259 was localized on lysosomes. Although the dimethylamine group of GIF2259 is not essential for the lysosome localization, it contributes to a high specific/nonspecific ratio of fluorescence. Under a normal condition, the lysosomal signal visualized by GIF2259 did not overlap with mitochondria, while, under starved or depolarization conditions, it overlapped with mitochondria, suggesting that GIF2259 could be used as a simple tool for monitoring lysosomal metabolism and mitochondrial turnover, that is mitophagy.

