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Updated: Oct 10, 2025

DNAzyme-dependent Analysis of rRNA 2’-O-Methylation
Published on: September 16, 2019
Recognition of G-quadruplex RNA by a crucial RNA methyltransferase component, METTL14
Atsuhiro Yoshida1, Takanori Oyoshi2, Akiyo Suda1
1Institute for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan.
Abstract:
N6-methyladenosine (m6A) is an important epitranscriptomic chemical modification that is mainly catalyzed by the METTL3/METTL14 RNA methyltransferase heterodimer. Although m6A is found at the consensus sequence of 5'-DRACH-3' in various transcripts, the mechanism by which METTL3/METTL14 determines its target is unclear. This study aimed to clarify the RNA binding property of METTL3/METTL14. We found that the methyltransferase heterodimer itself has a binding preference for RNA G-quadruplex (rG4) structures, which are non-canonical four-stranded structures formed by G-rich sequences, via the METTL14 RGG repeats. Additionally, the methyltransferase heterodimer selectively methylated adenosines close to the rG4 sequences. These results suggest a possible process for direct recruitment of METTL3/METTL14 to specific methylation sites, especially near the G4-forming regions. This study is the first to report the RNA binding preference of the m6A writer complex for the rG4 structure and provides insights into the role of rG4 in epitranscriptomic regulation.
Insights
The METTL3/METTL14 enzyme complex preferentially binds RNA G-quadruplex (rG4) structures. This binding preference guides the N6-methyladenosine (m6A) modification to specific sites near these structures.
Area of Science:
- Molecular Biology
- Epigenetics
- RNA Biology
Background:
- N6-methyladenosine (m6A) is a crucial epitranscriptomic modification.
- The METTL3/METTL14 complex catalyzes m6A methylation.
- The precise RNA targeting mechanism of METTL3/METTL14 remains unclear.
Purpose of the Study:
- To elucidate the RNA binding properties of the METTL3/METTL14 complex.
- To understand how METTL3/METTL14 selects its target RNAs.
Main Methods:
- Investigated RNA binding preferences of the METTL3/METTL14 heterodimer.
- Assessed methylation activity near specific RNA structures.
Main Results:
- The METTL3/METTL14 complex exhibits a binding preference for RNA G-quadruplex (rG4) structures.
- Binding occurs via the METTL14 RGG repeats.
- Methylation is selectively targeted to adenosines adjacent to rG4 sequences.
Conclusions:
- RNA G-quadruplex structures may directly recruit the METTL3/METTL14 complex.
- This study reveals a novel role for rG4 structures in guiding m6A epitranscriptomic regulation.
- Provides insights into the specificity of the m6A writer complex.
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