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Updated: Oct 10, 2025

A Reporter Based Cellular Assay for Monitoring Splicing Efficiency
Published on: September 15, 2021
Small molecule splicing modifiers with systemic HTT-lowering activity
Anuradha Bhattacharyya1, Christopher R Trotta1, Jana Narasimhan1
1PTC Therapeutics, Inc. 100 Corporate Court, South Plainfield, NJ, USA.
Insights
New orally bioavailable small molecules effectively reduce huntingtin (HTT) protein levels throughout the central nervous system (CNS) and periphery. This novel approach targets pre-messenger RNA splicing to degrade HTT mRNA, offering a promising therapeutic strategy for Huntington's disease (HD).
Area of Science:
- Neuroscience
- Genetics
- Pharmacology
Background:
- Huntington's disease (HD) is an inherited neurodegenerative disorder caused by expanded CAG trinucleotide repeats in the huntingtin (HTT) gene.
- Mutant HTT protein's toxic gain-of-function drives HD pathogenesis, with animal models showing reduced HTT levels alleviate symptoms.
- Current investigational drugs for HD require invasive delivery to the central nervous system (CNS) and lack broad CNS distribution.
Purpose of the Study:
- To identify orally bioavailable small molecules for reducing huntingtin (HTT) protein levels.
- To achieve broad distribution of therapeutic agents throughout the CNS.
- To develop a novel therapeutic strategy for Huntington's disease (HD) by modulating HTT expression.
Main Methods:
- Identification of orally bioavailable small molecules.
- Assessment of CNS and peripheral distribution of these molecules.
- Analysis of HTT expression levels following treatment.
- Investigation of the mechanism involving selective modulation of pre-messenger RNA splicing, specifically promoting stop-codon pseudoexon inclusion.
Main Results:
- Discovery of orally bioavailable small molecules demonstrating broad CNS distribution.
- Consistent reduction of HTT expression in both the CNS and periphery.
- Mechanism confirmed: compounds promote stop-codon pseudoexon inclusion, leading to HTT mRNA degradation.
Conclusions:
- Orally bioavailable small molecules can effectively lower HTT expression throughout the CNS and periphery.
- Targeting pre-messenger RNA splicing represents a novel and promising therapeutic approach for Huntington's disease (HD).
- This strategy offers potential for improved treatment delivery and efficacy compared to existing investigational drugs.
Abstract:
Huntington's disease (HD) is a hereditary neurodegenerative disorder caused by expansion of cytosine-adenine-guanine (CAG) trinucleotide repeats in the huntingtin (HTT) gene. Consequently, the mutant protein is ubiquitously expressed and drives pathogenesis of HD through a toxic gain-of-function mechanism. Animal models of HD have demonstrated that reducing huntingtin (HTT) protein levels alleviates motor and neuropathological abnormalities. Investigational drugs aim to reduce HTT levels by repressing HTT transcription, stability or translation. These drugs require invasive procedures to reach the central nervous system (CNS) and do not achieve broad CNS distribution. Here, we describe the identification of orally bioavailable small molecules with broad distribution throughout the CNS, which lower HTT expression consistently throughout the CNS and periphery through selective modulation of pre-messenger RNA splicing. These compounds act by promoting the inclusion of a pseudoexon containing a premature termination codon (stop-codon psiExon), leading to HTT mRNA degradation and reduction of HTT levels.
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