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RAD51 as a functional biomarker for homologous recombination deficiency in cancer: a promising addition to the HRD
Lise M van Wijk1, Andreea B Nilas1, Harry Vrieling1
1Department of Human Genetics, Leiden University Medical Center, Leiden, The Netherlands.
Introduction:
Carcinomas with defects in the homologous recombination (HR) pathway are sensitive to PARP inhibitors (PARPi). A robust method to identify HR-deficient (HRD) carcinomas is therefore of utmost clinical importance. Currently, available DNA-based HRD tests either scan HR-related genes such as BRCA1 and BRCA2 for the presence of pathogenic variants or identify HRD-related genomic scars or mutational signatures by using whole-exome or whole-genome sequencing data. As an alternative to DNA-based HRD tests, functional HRD tests have been developed that assess the actual ability of tumors to accumulate RAD51 protein at DNA double-strand breaks as a proxy for HR proficiency.
Areas Covered:
This review presents an overview of currently available HRD tests and discusses the pros and cons of the different methodologies including their sensitivity for the identification of HRD tumors, their concordance with other HRD tests, and their capacity to predict therapy response.
Expert Opinion:
With the increasing use of PARPi in the treatment of several cancers, there is an urgent need to implement HRD testing in routine clinical practice. To this end, calibration of HRD thresholds and clinical validation of both DNA-based and RAD51-based HRD tests should have top-priority in the coming years.
Insights
Identifying homologous recombination deficiency (HRD) in carcinomas is crucial for PARP inhibitor (PARPi) therapy. This review covers current DNA-based and functional HRD tests, highlighting their strengths and weaknesses for clinical use.
Area of Science:
- Oncology
- Genetics
- Molecular Biology
Background:
- Carcinomas with homologous recombination (HR) pathway defects are sensitive to poly (ADP-ribose) polymerase inhibitors (PARPi).
- Accurate identification of HR-deficient (HRD) carcinomas is clinically essential for effective PARPi treatment selection.
- Current HRD tests include DNA-based methods (gene sequencing, genomic scars) and functional assays (RAD51 protein accumulation).
Purpose of the Study:
- To provide a comprehensive overview of existing homologous recombination deficiency (HRD) testing methodologies.
- To critically evaluate the advantages and disadvantages of various HRD detection approaches.
- To assess the sensitivity, concordance, and predictive capacity of different HRD tests for therapy response.
Main Methods:
- Review of current literature on homologous recombination deficiency (HRD) testing.
- Comparative analysis of DNA-based HRD detection methods (e.g., BRCA mutation analysis, genomic scar identification).
- Evaluation of functional HRD assays assessing RAD51 protein accumulation at DNA double-strand breaks.
Main Results:
- Discussion of the sensitivity and concordance rates of various HRD tests in identifying deficient tumors.
- Analysis of the capacity of different HRD testing strategies to predict patient response to PARP inhibitors.
- Pros and cons of DNA-based versus functional HRD testing methodologies are presented.
Conclusions:
- The increasing application of PARPi necessitates the integration of HRD testing into routine clinical practice.
- Prioritization of HRD threshold calibration and clinical validation for both DNA-based and RAD51-based tests is recommended.
- Standardized and validated HRD testing is crucial for optimizing PARPi therapy outcomes in cancer patients.
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