Structural and functional insights into colicin: a new paradigm in drug discovery

Fatema Calcuttawala1, Ankita Pal2, Papri Nath2

  • 1Department of Microbiology, Sister Nivedita University, Kolkata, 700156, India. fatema.c@snuniv.ac.in.

Archives of Microbiology
|December 20, 2021
PubMed

Insights

Colicins are bacterial proteins that kill competing bacteria. Understanding colicin structure and function is key to using them as novel antibiotics against drug-resistant infections.

Area of Science:

  • Microbiology
  • Molecular Biology
  • Biochemistry

Background:

  • Colicins are bacteriocins produced by enterobacteria, conferring a competitive ecological advantage.
  • These protein toxins are typically encoded on plasmids and involve activity, immunity, and lysis genes.
  • Colicins possess a tripartite structure: receptor-binding, translocation, and cytotoxic domains.

Purpose of the Study:

  • To provide a comprehensive review of colicin structure and function.
  • To elucidate the diverse mechanisms of colicin-mediated cell lethality.
  • To highlight the therapeutic potential of colicins as alternatives to antibiotics.

Main Methods:

  • Literature review of colicin research.
  • Analysis of colicin structure-function relationships.
  • Examination of colicin translocation mechanisms (Tol and Ton systems).

Main Results:

  • Colicins bind specific receptors and translocate into target cells.
  • Lethality is achieved through various mechanisms including DNase, RNase activity, pore formation, and peptidoglycan inhibition.
  • Colicins exhibit specific toxicity towards target cells with minimal impact on beneficial commensals.

Conclusions:

  • Detailed knowledge of colicin structure and action is crucial for their therapeutic application.
  • Colicins represent promising alternatives to conventional antibiotics for treating multidrug-resistant infections.
  • The specific targeting and low impact on commensal microbiota make colicins attractive candidates for antimicrobial therapy.

Related Concept Videos

Drug Discovery: Overview01:26

Drug Discovery: Overview

Drug discovery is a multifaceted process involving extensive screening, testing, and optimization of lead compounds to identify potential new drugs for therapeutic use. It combines several approaches, including screening large numbers of natural products, chemical modification of known active molecules, identification of new drug targets, and rational design based on biological mechanisms and drug-receptor structure. These approaches are carried out in both academic research laboratories and...
9.4K
Structure-Activity Relationships and Drug Design01:28

Structure-Activity Relationships and Drug Design

Drug design is a dynamic field that involves discovering and developing new medications based on specific biological targets. This process heavily relies on structure-activity relationships (SAR) and quantitative structure-activity relationships (QSAR) to guide the design and optimization of efficient drugs.
SAR studies the intricate relationship between a drug's chemical structure and biological activity. It focuses on understanding how modifications to a drug's structure can influence...
1.2K
Targets for Drug Action: Overview01:26

Targets for Drug Action: Overview

Drugs target macromolecules to modify ongoing cellular processes. Primary drug targets include receptors, ion channels, transporters, and enzymes.
Receptors are either membrane-spanning or intracellular proteins, which upon binding a ligand, get activated and transmit the signal downstream to elicit a response. Drugs bind receptors, either mimicking the action of endogenous ligands or blocking the receptor activity to bring about a modified response. Nearly 35% of approved drugs target the G...
7.9K
G Protein-coupled Receptors01:15

G Protein-coupled Receptors

G Protein-Coupled Receptors or GPCRs are membrane-bound receptors that transiently associate with heterotrimeric G proteins and induce an appropriate response to sensory stimuli such as light, odors, hormones, cytokines, or neurotransmitters.
GPCRs are also called heptahelical, 7TM, or serpentine receptors, and consist of seven (H1-H7) transmembrane alpha-helices that span the bilayer to form a cylindrical core. The transmembrane helices are connected by three extracellular loops and three...
13.9K
Protein-Drug Binding: Mechanism and Kinetics01:16

Protein-Drug Binding: Mechanism and Kinetics

Protein-drug binding refers to the interaction between drugs and proteins within the body. This binding process can occur intracellularly, involving drug interactions with enzymes or receptors within cells, or extracellularly, involving plasma proteins in the blood.
Various forces drive these interactions, including hydrogen bonds, hydrophobic interactions, ionic bonds, electrostatic interactions, and van der Waals forces. These bonds enable drugs to bind to specific sites on proteins,...
1.2K
Ligand Binding and Linkage00:49

Ligand Binding and Linkage

Allosteric proteins have more than one ligand binding site; the binding of a ligand to any of these sites influences the binding of ligands to the other sites. When a protein is allosteric, its binding sites are called coupled or linked.  In the case of enzymes, the site that binds to the substrate is known as the active site and the other site is known as the regulatory site. When a ligand binds to the regulatory site, this leads to conformational changes in the protein that can influence...
5.1K