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Continuous reference intervals for pediatric testosterone, sex hormone binding globulin and free testosterone using
Daniel T Holmes1,2, J Grace van der Gugten1, Benjamin Jung3
1St. Paul's Hospital, Department of Pathology and Laboratory Medicine, 1081 Burrard St., Vancouver, BC V6Z 1Y6, Canada.
Insights
This study introduces a reproducible R language workflow for continuous reference intervals for testosterone (T), free testosterone (FT), bioavailable testosterone (BAT), and sex hormone binding globulin (SHBG) in pediatric endocrinology.
Area of Science:
- Pediatric Endocrinology
- Biomarker Analysis
- Statistical Modeling
Background:
- Age-dependent reference intervals are crucial for interpreting testosterone (T), SHBG, free T (FT), and bioavailable T (BAT) in pediatric endocrinology.
- Traditional partitioning methods create abrupt age-group differences and data loss, especially during puberty.
- Existing continuous methods lack reproducibility due to complex parameter fitting.
Purpose of the Study:
- To present a reproducible workflow for non-parametric continuous reference intervals for T, FT, BAT, and SHBG.
- To address limitations of traditional age-partitioning methods in pediatric endocrine testing.
- To facilitate smoother, data-driven reference interval transitions across pediatric age groups.
Main Methods:
- Utilized the R language quantregGrowth package for non-parametric continuous reference interval analysis.
- Applied the methodology to testosterone (LC-MS/MS), calculated FT and BAT, and measured SHBG (Roche Cobas e601).
- Detailed the continuous interval methodology with code examples and illustrations for enhanced reproducibility.
Main Results:
- Developed and demonstrated a reproducible workflow for continuous reference intervals.
- Successfully applied the method to key pediatric endocrine hormones: T, FT, BAT, and SHBG.
- Provided detailed code and illustrations to ensure methodological transparency and ease of adoption.
Conclusions:
- The presented R workflow enables reproducible, non-parametric continuous reference intervals for pediatric endocrine tests.
- This approach overcomes the drawbacks of age-partitioning, offering smoother and more accurate interpretations.
- The detailed methodology supports wider adoption and consistent application in clinical and research settings.
Abstract:
Testosterone (T), sex hormone binding globulin (SHBG), free testosterone (FT) and bioavailable testosterone (BAT) are commonly employed tests in pediatric endocrinology and all require age-dependent reference intervals for interpretation. The common methods used to derive these reference intervals require decisions about data shape and/or age partition thresholds, which can result in sharp differences between age groups, particularly for pubescent children. Partitioning also results in a form of data loss, where data from one age-bin is completed disconnected from the adjacent age-bins. Non-parametric continuous reference intervals methods have previously been developed to avoid some of these drawbacks. These strategies use all the available data and smooth transitions between ages avoiding partitioning. However, the fitting process involves selection and adjustment of many parameters and it can be difficult to maintain a reproducible approach. Here we provide a workflow for non-parametric continuous reference intervals applied to T, FT, BAT, and SHBG using the R language quantregGrowth package. T measurements were determined by LC-MS/MS, FT and BAT were calculated, and SHBG was measured on the Roche Cobas e601. The continuous interval methodology is described in detail with code examples and illustrations for reproducibility.
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