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Using bi-dimensional representations to understand patterns in COVID-19 blood exam data
Vitor P Bezzan1, Cleber D Rocco2
1Instituto de Matemática, Estatistica e Computação Científica, Universidade Estadual de Campinas, Brazil.
Informatics in Medicine Unlocked
|January 4, 2022
Summary
This study introduces a novel method using Uniform Manifold Approximation and Projection (UMAP) and DBSCAN clustering to analyze blood test data for COVID-19, revealing infection patterns and hematological implications.
Area of Science:
- Medical diagnostics
- Data science in healthcare
- Hematology
Background:
- Blood tests are crucial for medical diagnosis.
- Disease manifestations, like COVID-19, can vary significantly.
- Multivariate blood test data presents analytical challenges.
Purpose of the Study:
- To develop a method for extracting insights from blood test data.
- To identify patterns related to infection prevalence using advanced analytics.
- To explore the hematological implications of systemic diseases like COVID-19.
Main Methods:
- Utilized Uniform Manifold Approximation and Projection (UMAP) for dimension reduction.
- Applied DBSCAN clustering to identify distinct data groups.
- Employed statistical approaches to analyze blood test parameters and infection prevalence.
Main Results:
- Identified distinct clusters indicating infection prevalence ranging from 2% to 37%.
- Demonstrated the method's capability to uncover complex data patterns.
- Highlighted significant hematological implications, particularly on white-cell fractions, with relevant statistical p-values (0.03-0.1).
Conclusions:
- The proposed UMAP and DBSCAN method effectively analyzes blood test data for disease patterns.
- COVID-19 exhibits systemic effects with significant hematological impacts.
- This analytical approach can be applied to various diseases for discovering new data patterns.
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