Deformation of the nucleus by TGFβ1 via the remodeling of nuclear envelope and histone isoforms

Ya-Hui Chi1,2, Wan-Ping Wang3, Ming-Chun Hung3

  • 1Institute of Biotechnology and Pharmaceutical Research, National Health Research Institutes, 35 Keyan Road, Zhunan, Miaoli County, 35053, Taiwan. ychi@nhri.edu.tw.

Epigenetics & Chromatin
|January 5, 2022
PubMed

Insights

Transforming growth factor beta 1 (TGFβ1) stimulation causes nuclear deformation by altering chromatin and nuclear lamina composition. This process involves histone H3.3, lamin A, and nuclear envelope proteins, impacting cell shape in pre-neoplastic and malignant tissues.

Area of Science:

  • Cell Biology
  • Molecular Biology
  • Cancer Research

Background:

  • Nuclear shape abnormalities are common in pre-neoplastic and malignant tissues.
  • The underlying mechanisms driving these changes remain unclear.
  • Understanding nuclear morphology is crucial for cancer progression studies.

Purpose of the Study:

  • To investigate the molecular mechanisms behind TGFβ1-induced nuclear deformation.
  • To identify key proteins and signaling pathways involved in altering nuclear shape.
  • To elucidate the relationship between nuclear lamina composition and chromatin structure.

Main Methods:

  • Utilized TGFβ1 stimulation in various cell lines (e.g., Huh7).
  • Analyzed histone H3.3 expression and SMAD signaling pathways.
  • Investigated the roles of nuclear envelope proteins lamin B1, SUN1, and lamin A.
  • Examined chromatin structure, including histone H3K27me3 and histone H1 modifications.

Main Results:

  • TGFβ1 stimulation induced significant nuclear deformation in multiple cell lines.
  • Upregulated histone H3.3 expression, downstream of SMAD signaling, was essential for this deformation.
  • Nuclear envelope proteins lamin B1 and SUN1 were required for the process.
  • Lamin A exhibited high mobility, clustering at the nuclear periphery and re-entering the nucleoplasm.
  • Chromatin regions losing nuclear envelope coverage formed supra-nucleosomal structures with elevated histone H3K27me3 and histone H1, dependent on lamin A.

Conclusions:

  • TGFβ1 signaling modulates nuclear shape through dynamic changes in chromatin and nuclear lamina composition.
  • Histone H3.3, lamin A, and specific histone modifications play critical roles in TGFβ1-induced nuclear deformation.
  • These findings offer insights into nuclear abnormalities in cancer and potential therapeutic targets.

Related Concept Videos

Nucleosome Remodeling02:54

Nucleosome Remodeling

Nucleosomes are the basic units of chromatin compaction. Each nucleosome consists of the DNA bound tightly around a histone core, which makes the DNA inaccessible to DNA binding proteins such as DNA polymerase and RNA polymerase. Hence, the fundamental problem is to ensure access to DNA when appropriate, despite the compact and protective chromatin structure.
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
9.8K
TGF - β Signaling Pathway01:16

TGF - β Signaling Pathway

The TGF-β signaling pathway regulates cell growth, differentiation, adhesion, motility, and development. TGF-β ligands that induce TGF-β signaling are synthesized in their latent form. Several proteases or cell surface receptors such as integrins act upon the latent form, releasing the active ligand. There are three types of mammalian TGF-βs: (TGF-β1, TGF-β2, and TGF-β3) that bind as homodimers or heterodimers to TGF-β receptors. The TGF-β receptors...
8.0K
Chromatin Modification in iPS Cells01:32

Chromatin Modification in iPS Cells

Chromatin modification alters gene expression; therefore, scientists can add histone-modifying enzymes, histone variants, and chromatin remodeling complexes to somatic cells to aid reprogramming into pluripotent stem (iPS) cells.
Compact chromatin makes reprogramming difficult. Enzymes, such as histone demethylases and acetyltransferases, are often added during reprogramming to loosen the chromatin, making the DNA more accessible to transcription factors. Molecules that inhibit histone...
2.0K
Methods of Nuclear Reprogramming01:24

Methods of Nuclear Reprogramming

Nuclear reprogramming is a process of transforming one cell type into an unrelated cell type by epigenetic changes that alter the cell’s original gene expression pattern. Such epigenetic changes force cells to express a different set of genes, which play a significant role in inducing transformation into other cell types. Nuclear reprogramming offers applications in reproductive cloning for livestock propagation and regenerative medicine — developing patient-specific cells for...
1.9K
Spreading of Chromatin Modifications02:25

Spreading of Chromatin Modifications

The histone proteins in the nucleosomes are post-translationally modified (PTM) to increase or decrease access to DNA. The commonly observed PTMs are methylation, acetylation, phosphorylation, and ubiquitination of lysine amino acids in the histone H3 tail region. These histone modifications have specific meaning for the cell. Hence, they are called "histone code". The protein complex involved in histone modification is termed as "reader-writer" complex.
Writers
The writer...
8.7K
Introduction to Nuclear Reprogramming01:14

Introduction to Nuclear Reprogramming

Nuclear reprogramming is the process of switching gene expression of one cell type to that of another cell type, usually from a differentiated cell state to an undifferentiated cell state. Differentiation occurs during processes such as development and morphogenesis, tissue regeneration, and malignancy. Cells can also be artificially induced to reprogram their gene expression by techniques such as nuclear transfer, induced pluripotency, and cell fusion. Such techniques have many applications in...
2.0K