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Exact and computationally efficient Bayesian inference for generalized Markov modulated Poisson processes.

Flávio B Gonçalves1, Lívia M Dutra2, Roger W C Silva1

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This study introduces a new Cox process model for temporal point patterns, enabling efficient Bayesian inference for complex data. The method accurately models epidemic curves, as shown with Dengue Fever and COVID-19 data.

Keywords:
Fast computationMetropolis-Hastings algorithmUniformization

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Area of Science:

  • Statistics
  • Epidemiology
  • Computational Statistics

Background:

  • Statistical modeling of temporal point patterns is crucial across various scientific fields.
  • The Cox process is a widely used model for such data, featuring a stochastic intensity function.
  • Existing models may lack efficiency or flexibility for complex temporal dynamics.

Purpose of the Study:

  • To introduce a novel class of unidimensional Cox process models with state-switching parametric intensity functions.
  • To develop an exact Bayesian inference methodology using Markov Chain Monte Carlo (MCMC) algorithms.
  • To provide a computationally efficient and applicable method for analyzing large temporal point pattern datasets, including epidemic curves.

Main Methods:

  • Development of a new Cox process model where the intensity function follows a continuous-time Markov chain.
  • Implementation of exact Bayesian inference via MCMC algorithms, addressing reliability and specification issues.
  • Validation through simulated data and real-world case studies, including epidemic data analysis.

Main Results:

  • The proposed methodology enables computationally efficient Bayesian inference for complex Cox process models.
  • The new class of models effectively captures dynamic changes in intensity functions.
  • The approach demonstrates high efficiency and applicability in analyzing temporal point patterns, including epidemic forecasting.

Conclusions:

  • The novel Cox process models and associated Bayesian inference methodology offer a powerful tool for statistical modeling of temporal point patterns.
  • The method is particularly well-suited for analyzing epidemic curves, providing insights into disease dynamics.
  • The computational efficiency allows for application to large datasets, advancing research in epidemiology and other fields.