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Published on: October 24, 2019
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A web-based tool for automatically linking clinical trials to their publications
Neil R Smalheiser1, Arthur W Holt1
1Department of Psychiatry, University of Illinois College of Medicine, Chicago, Illinois, USA.
Journal of the American Medical Informatics Association : JAMIA
|January 12, 2022
Summary
Manually linking clinical trial registry records to publications is difficult. A new statistical model and free web tool automatically identify PubMed articles reporting clinical trial outcomes, improving research efficiency.
Area of Science:
- Biomedical Informatics
- Clinical Trial Management
- Publication Tracking
Background:
- Evaluating clinical trial outcomes requires linking registry data with publications.
- Manual searching for associated publications is time-consuming and unreliable.
Purpose of the Study:
- To develop a statistical model for automatically identifying PubMed articles reporting clinical outcome results from registered trials.
- To create a publicly accessible tool to aid researchers in this process.
Main Methods:
- A machine learning model was trained using pairs of registered trials and their known publications.
- Features included matching metadata between PubMed articles and trial registry fields, and known publication links.
Main Results:
- The model effectively ranked known linked articles, with a median best rank of 1.0.
- 91% of known linked publications were ranked within the top 10 results.
Conclusions:
- The developed model and web tool automate the identification of clinical trial publications.
- This facilitates the study of trial outcomes and their relationship to original trial designs.
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