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Thrombotic Risk Determined by Protein C Receptor (PROCR) Variants among Middle-Aged and Older Adults: A
Eric Manderstedt1, Christer Halldén1, Christina Lind-Halldén1
1Department of Environmental Science and Bioscience, Kristianstad University, Kristianstad, Sweden.
Insights
Homozygosity for the protein C receptor (PROCR) Ser219Gly variant increases venous thromboembolism (VTE) risk. A rare Arg113Cys PROCR variant also showed an association with VTE, while other variants did not impact risk.
Area of Science:
- Genetics and Thrombosis
- Molecular Biology
- Epidemiology
Background:
- The protein C (PC) system is crucial for hemostatic balance.
- A specific missense variant (Ser219Gly) in the PC receptor (PROCR) gene has been linked to venous thromboembolism (VTE).
Purpose of the Study:
- To investigate the thrombotic risk associated with rare and common PROCR gene variants in a large cohort of middle-aged and older adults.
- To identify specific PROCR variants contributing to VTE risk.
Main Methods:
- Exonic sequencing of the PROCR gene in 28,794 individuals from the Malmö Diet and Cancer study.
- Analysis included the Ser219Gly variant and other qualifying variants (loss-of-function or nonbenign missense variants with minor allele frequencies <0.1%).
- VTE incidence was tracked until 2018, with statistical analysis using Kaplan-Meier and Cox regression models.
Main Results:
- 36 PROCR variants were identified, including 22 missense and 3 loss-of-function variants.
- Homozygosity for the Ser219Gly variant significantly increased VTE risk (HR=1.5), while heterozygosity had no effect.
- The Arg113Cys missense variant (rs146420040) was associated with increased VTE risk (HR=1.3), but other rare variants did not contribute to risk.
Conclusions:
- Homozygosity for the Ser219Gly PROCR variant is associated with an elevated risk of VTE.
- The Arg113Cys PROCR variant is also linked to VTE, confirming its functional significance.
- Most other identified PROCR variants do not appear to influence VTE risk in this population.
Background:
The protein C (PC) anticoagulant system has a key role in maintaining hemostatic balance. One missense (Ser219Gly) variant in the PC receptor (PROCR) was associated with venous thromboembolism (VTE) in genome-wide association studies.
Objectives:
This study aimed to determine the thrombotic risk of rare and common PROCR variants in a large population-based cohort of middle-aged and older adults.
Methods:
The exonic sequence of PROCR was analyzed for the Ser219Gly variant and other qualifying variants in 28,794 subjects (born 1923-1950, 60% women) without previous VTE, who participated in the Malmö Diet and Cancer study (1991-1996). Incidence of VTE was followed up until 2018. Qualifying variants were defined as loss-of-function or nonbenign (PolyPhen-2) missense variants with minor allele frequencies (MAFs) <0.1%.
Results:
Re-sequencing identified 36 PROCR variants in the study population (26,210 non-VTE exomes and 2,584 VTE exomes), 11 synonymous, 22 missense, and three loss-of-function variants. Kaplan-Meier analysis of the known Ser219Gly variant (rs867186) showed that homozygosity for this variant increased the risk of disease, whereas heterozygosity showed no effect. Cox multivariate regression analysis revealed an adjusted hazard ratio (HR) of 1.5 (95% confidence interval [CI]: 1.1-2.0). Fifteen rare variants were classified as qualifying and were included in collapsing analysis (burden test and SKAT-O). They did not contribute to risk. However, a Arg113Cys missense variant (rs146420040; MAF = 0.004) showed an increased VTE risk (HR = 1.3; 95% CI: 1.0-1.9).
Conclusion:
Homozygosity for the Ser219Gly variant and a previously identified functional PROCR variant (Arg113Cys) was associated with VTE. Other variants did not contribute to VTE.
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