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Deep Learning-Based Parameter Mapping with Uncertainty Estimation for Fat Quantification using Accelerated

Shu-Fu Shih1,2, Sevgi Gokce Kafali1,2, Tess Armstrong1

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Summary

This study introduces a novel deep learning framework for faster and more accurate liver fat quantification using magnetic resonance imaging (MRI). The method enhances image quality from undersampled data and reduces scan time significantly.

Keywords:
deep learningfat quantificationfree-breathing MRIradial MRIuncertainty estimation

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Area of Science:

  • Medical Imaging
  • Artificial Intelligence
  • Quantitative MRI

Background:

  • Deep learning (DL) is used for artifact removal in undersampled MRI and signal fitting in quantitative MRI.
  • These tasks are typically handled separately, limiting the exploitation of shared information.
  • Accelerated MRI protocols are crucial for reducing scan times, especially in applications like liver fat quantification.

Purpose of the Study:

  • To develop a unified, two-stage deep learning framework for artifact removal and signal fitting in quantitative MRI.
  • To estimate pixel-wise uncertainty levels within the quantitative MRI data.
  • To improve the efficiency and accuracy of liver fat quantification using accelerated free-breathing radial MRI.

Main Methods:

  • A novel two-stage deep learning framework was proposed, integrating artifact removal and signal fitting.
  • The framework was applied to accelerated free-breathing radial MRI data for liver fat quantification.
  • Pixel-wise uncertainty estimation was incorporated into the framework.

Main Results:

  • The proposed framework achieved high image quality from undersampled radial data.
  • Accurate liver fat quantification was demonstrated with reduced computational time (<100 ms/slice).
  • The framework successfully detected uncertainty arising from noisy input data.

Conclusions:

  • The integrated framework effectively addresses artifact removal and signal fitting in quantitative MRI.
  • The method enables significant acceleration (3-fold) with a scan time under 1 minute.
  • This approach enhances the feasibility of rapid and reliable liver fat quantification in clinical settings.