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Isolation of Ribosome Bound Nascent Polypeptides in vitro to Identify Translational Pause Sites Along mRNA
Published on: July 6, 2012
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Ageing exacerbates ribosome pausing to disrupt cotranslational proteostasis
Kevin C Stein1, Fabián Morales-Polanco1, Joris van der Lienden1
1Department of Biology, Stanford University, Stanford, CA, USA.
Nature
|January 20, 2022
Summary
Ageing impairs cellular protein quality control by increasing ribosome pausing during translation. This leads to the accumulation of misfolded proteins and contributes to age-related decline.
Area of Science:
- Molecular Biology
- Gerontology
- Cellular Biology
Background:
- Cellular proteostasis declines with age, contributing to protein misfolding diseases.
- The mechanisms by which ageing impairs proteostasis are not fully understood.
- Nascent polypeptides pose a significant challenge to the proteostasis network.
Purpose of the Study:
- To investigate the hypothesis that altered translational efficiency during ageing contributes to proteostasis collapse.
- To elucidate the role of ribosome pausing and ribosome-associated quality control (RQC) in the ageing process.
Main Methods:
- Comparative analysis of translation elongation kinetics in aged Caenorhabditis elegans and Saccharomyces cerevisiae.
- Identification of ribosome pausing sites, including polybasic stretches.
- Assessment of RQC substrate clearance and aggregation in aged yeast.
- Correlation of lifespan with ribosome pausing and RQC pathway flux in yeast mutants.
Main Results:
- Ageing alters translation elongation kinetics, exacerbating ribosome pausing at specific sites in yeast and worms.
- Increased ribosome pausing leads to ribosome collisions and triggers the RQC pathway.
- Aged yeast cells show impaired RQC substrate clearance and increased aggregation.
- Long-lived yeast mutants exhibit reduced age-dependent ribosome pausing and enhanced RQC flux.
- Nascent polypeptides with age-dependent ribosome pausing are enriched in age-dependent protein aggregates in C. elegans.
Conclusions:
- Increased ribosome pausing during ageing overwhelms the RQC pathway, leading to nascent polypeptide aggregation.
- This RQC overload critically contributes to proteostasis impairment and systemic decline during ageing.
- Targeting translation efficiency and RQC could be potential strategies for mitigating age-related proteostasis decline.
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