Related Experiment Video
Updated: Oct 6, 2025

11:13
Mass Spectrometry-Guided Genome Mining as a Tool to Uncover Novel Natural Products
Published on: March 12, 2020
11.1K
Mining for Active Molecules in Probiotic Supernatant by Combining Non-Targeted Metabolomics and Immunoregulation
Juliano Roldan Fonseca1, Marianna Lucio1, Mourad Harir1
1Research Unit Analytical BioGeoChemistry, Helmholtz Zentrum München, 85764 Neuherberg, Germany.
Metabolites
|January 20, 2022
Summary
Probiotics may offer alternative therapies for chronic respiratory diseases by modulating the immune system. Research identified the tryptophan metabolic pathway as key to the immune-regulating activity of bioactive probiotic compounds.
Area of Science:
- Microbiology and Immunology
- Metabolomics
- Biochemistry
Background:
- Chronic respiratory diseases like asthma are increasing globally, necessitating novel therapeutic strategies.
- Probiotics show potential in disease prevention and symptom reduction through immune system modulation via secreted metabolites.
- Previous research identified the amino acid d-Trp as having immunoregulatory bioactivity.
Purpose of the Study:
- To associate metabolic pathway activity with the in vitro immunomodulatory activity of probiotic strains.
- To identify key metabolic pathways involved in the bioactivity of probiotic supernatants.
- To explore the potential of metabolomics in discovering novel bioactive compounds from probiotics.
Main Methods:
- Metabolic footprinting of 25 commercial probiotic strains using untargeted liquid chromatography-mass spectrometry (LC-MS).
- Sample preparation involved protein precipitation and solid-phase extraction (SPE) with HLB and CN-E cartridges.
- Multivariate statistical analyses and pathway analysis were employed to distinguish bioactive from non-bioactive samples.
Main Results:
- Metabolomic analysis revealed an overrepresentation of the tryptophan metabolic pathway in bioactive probiotic supernatants.
- Specific molecular features within the tryptophan pathway were associated with observed in vitro immunomodulatory activity.
- The study successfully differentiated bioactive and non-bioactive probiotic samples based on metabolic profiles.
Conclusions:
- The tryptophan metabolic pathway is implicated in the immunomodulatory effects of certain probiotics.
- Metabolomics is a powerful tool for identifying bioactive compounds and driving product development in the probiotic industry.
- This research provides a foundation for discovering novel immunoregulatory molecules from probiotic sources.

