Related Experiment Video
Updated: Oct 5, 2025

Identifying Caspases and their Motifs that Cleave Proteins During Influenza A Virus Infection
Published on: July 21, 2022
Innate immune sensing of influenza A viral RNA through IFI16 promotes pyroptotic cell death
Shalabh Mishra1, Athira S Raj1, Akhilesh Kumar1
1Department of Biological Sciences, Laboratory of Immunology and Infectious Disease Biology, Indian Institute of Science Education and Research (IISER) Bhopal, Bhopal 462066, MP, India.
Abstract:
Programmed cell death pathways are triggered by various stresses or stimuli, including viral infections. The mechanism underlying the regulation of these pathways upon Influenza A virus (IAV) infection is not well characterized. We report that a cytosolic DNA sensor IFI16 is essential for the activation of programmed cell death pathways in IAV infected cells. We have identified that IFI16 functions as an RNA sensor for the influenza A virus by interacting with genomic RNA. The activation of IFI16 triggers the production of type I, III interferons, and also pro-inflammatory cytokines via the STING-TBK1 and Pro-caspase-1 signaling axis, thereby promoting cell death (apoptosis and pyroptosis in IAV infected cells). On the contrary, IFI16 knockdown cells showed reduced inflammatory responses and also prevented cell mortality during IAV infection. Collectively, these results demonstrate the pivotal role of IFI16-mediated IAV sensing and its essential role in activating programmed cell death pathways.
Insights
Influenza A virus infection activates programmed cell death through the cytosolic sensor IFI16, which acts as an RNA sensor. This triggers inflammatory responses and cell death, but blocking IFI16 reduces these effects.
Area of Science:
- Immunology
- Virology
- Cell Biology
Background:
- Programmed cell death pathways are crucial responses to cellular stress, including viral infections.
- The specific mechanisms regulating these pathways during Influenza A virus (IAV) infection remain incompletely understood.
Purpose of the Study:
- To elucidate the role of the cytosolic DNA sensor IFI16 in programmed cell death activation during IAV infection.
- To identify IFI16's function in sensing IAV and initiating downstream signaling cascades.
Main Methods:
- Investigated IFI16's interaction with IAV genomic RNA.
- Analyzed the activation of interferon and pro-inflammatory cytokine production via STING-TBK1 and Pro-caspase-1 signaling.
- Assessed cell death (apoptosis and pyroptosis) and inflammatory responses in IFI16-expressing and IFI16-knockdown cells upon IAV infection.
Main Results:
- IFI16 acts as an RNA sensor for IAV, interacting with its genomic RNA.
- IFI16 activation leads to the production of type I and III interferons and pro-inflammatory cytokines.
- This activation involves the STING-TBK1 and Pro-caspase-1 signaling axes, promoting apoptosis and pyroptosis.
- Conversely, IFI16 knockdown significantly reduced inflammatory responses and prevented cell mortality in IAV-infected cells.
Conclusions:
- IFI16 plays a pivotal role in sensing IAV infection.
- IFI16 is essential for activating programmed cell death pathways, including apoptosis and pyroptosis, in response to IAV.
- Targeting IFI16-mediated sensing offers a potential strategy to modulate inflammatory responses and cell death during IAV infection.
Related Concept Videos
Leaky Scanning
Immune Response Against Viral Pathogens
NK Cells
NK cells are a crucial part of our innate immune system, acting as the first line of defense against viral infections. These cells can recognize and kill infected cells without prior exposure to the virus, effectively slowing down the spread of infection. Additionally, NK cells produce proinflammatory...
The Extrinsic Apoptotic Pathway
Experimental RNAi
Cells of the Innate Immune Response
Phagocytes
Phagocytes police the peripheral tissues by removing cellular debris and responding to the invasion of foreign substances or pathogens. Many phagocytes attack and remove microorganisms even before lymphocytes detect them. The human body has two general...
RNA Interference
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...

