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Updated: Oct 5, 2025

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
Neonatal-lethal dilated cardiomyopathy due to a homozygous LMOD2 donor splice-site variant
Michaela Yuen1,2, Lisa Worgan3, Jessika Iwanski4
1Kids Neuroscience Centre, The Children's Hospital at Westmead, Westmead, NSW, Australia. michaela.yuen@sydney.edu.au.
Insights
A novel splice-site variant in the LMOD2 gene causes lethal dilated cardiomyopathy (DCM) in newborns. This genetic defect leads to absent LMOD2 protein, short actin filaments, and severe heart dysfunction.
Area of Science:
- Genetics
- Cardiology
- Molecular Biology
Background:
- Dilated cardiomyopathy (DCM) is a severe heart condition characterized by enlarged ventricles and impaired contractility, often leading to heart failure.
- Previous research linked leiomodin-2 (LMOD2) gene variants to a rare, lethal form of neonatal DCM.
- The precise molecular mechanisms underlying LMOD2-associated DCM remain incompletely understood.
Purpose of the Study:
- To investigate the genetic cause of lethal DCM in two siblings.
- To elucidate the functional consequences of a novel LMOD2 splice-site variant.
- To confirm the role of LMOD2 in cardiac development and function.
Main Methods:
- Whole exome sequencing to identify genetic variants in affected siblings.
- Pre-mRNA splicing assays and Western blot analysis to assess LMOD2 mRNA and protein expression.
- Immunostaining of cardiac tissue to examine actin filament structure.
Main Results:
- Identified a homozygous splice-site variant (c.273+1G>A) in the LMOD2 gene in both siblings.
- Demonstrated that the variant abrogates canonical LMOD2 mRNA splicing and leads to absence of full-length LMOD2 protein.
- Observed abnormally short actin-thin filaments in the probands' heart tissue.
Conclusions:
- The LMOD2 splice-site variant is pathogenic, causing loss of functional LMOD2 protein.
- Absence of LMOD2 disrupts actin filament organization, leading to severe cardiac contractile dysfunction and neonatal DCM.
- This study highlights the critical role of LMOD2 in cardiac development and identifies the first splice-site variant associated with DCM.
Abstract:
Dilated cardiomyopathy (DCM) is characterized by cardiac enlargement and impaired ventricular contractility leading to heart failure. A single report identified variants in leiomodin-2 (LMOD2) as a cause of neonatally-lethal DCM. Here, we describe two siblings with DCM who died shortly after birth due to heart failure. Exome sequencing identified a homozygous LMOD2 variant in both siblings, (GRCh38)chr7:g.123656237G > A; NM_207163.2:c.273 + 1G > A, ablating the donor 5' splice-site of intron-1. Pre-mRNA splicing studies and western blot analysis on cDNA derived from proband cardiac tissue, MyoD-transduced proband skin fibroblasts and HEK293 cells transfected with LMOD2 gene constructs established variant-associated absence of canonically spliced LMOD2 mRNA and full-length LMOD2 protein. Immunostaining of proband heart tissue unveiled abnormally short actin-thin filaments. Our data are consistent with LMOD2 c.273 + 1G > A abolishing/reducing LMOD2 transcript expression by: (1) variant-associated perturbation in initiation of transcription due to ablation of the intron-1 donor; and/or (2) degradation of aberrant LMOD2 transcripts (resulting from use of alternative transcription start-sites or cryptic splice-sites) by nonsense-mediated decay. LMOD2 expression is critical for life and the absence of LMOD2 is associated with thin filament shortening and severe cardiac contractile dysfunction. This study describes the first splice-site variant in LMOD2 and confirms the role of LMOD2 variants in DCM.
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