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Long noncoding RNA LHFPL3-AS2 suppresses metastasis of non-small cell lung cancer by interacting with SFPQ to
Zhuoan Cheng1, Chunlai Lu2, Hui Wang1
1State Key Laboratory of Oncogenes and Related Genes, Shanghai Cancer Institute, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, 200032, China.
Abstract:
Lung cancer is the most common cancer and the leading cause of cancer deaths worldwide. In addition to coding genes, the contribution of long noncoding RNA (lncRNA) to non-small cell lung cancer (NSCLC) remains unclear. Here, we explored lncRNA expression profiles by Affymetrix Gene Chip Human Transcriptome Array 2.0 in 37 paired samples of tumorous NSCLC tissues and adjacent nontumorous tissues. We showed that LHFPL3-AS2 is a novel lncRNA, significantly decreased in NSCLC tissues. LHFPL3-AS2 was further validated in an additional 93 paired samples of NSCLC. Low levels of LHFPL3-AS2 expression were highly correlated with poor overall survival, TNM stage, and metastasis of NSCLC patients. Enhanced expression of LHFPL3-AS2 inhibited NSCLC invasion and metastasis in vitro and in vivo. Moreover, downregulation of LHFPL3-AS2 reduced its specific interaction with SFPQ, resulting in more SFPQ binding to the promoter of TXNIP and causing the transcriptional repression of TXNIP, thus finally promoting the migration and invasion of NSCLC cells. Furthermore, LHFPL3-AS2 was shown to be regulated by EGR1 under hypoxia.
Insights
This study identifies LHFPL3-AS2 as a novel long noncoding RNA (lncRNA) significantly decreased in non-small cell lung cancer (NSCLC). Lower LHFPL3-AS2 levels correlate with poor prognosis and promote NSCLC cell invasion and metastasis.
Area of Science:
- Oncology
- Molecular Biology
- Genomics
Background:
- Lung cancer is a leading cause of cancer mortality globally.
- The role of long noncoding RNAs (lncRNAs) in non-small cell lung cancer (NSCLC) pathogenesis is not fully understood.
- Identifying novel molecular markers and therapeutic targets is crucial for improving NSCLC outcomes.
Purpose of the Study:
- To investigate the expression profile and functional role of lncRNAs in NSCLC.
- To identify novel lncRNAs associated with NSCLC progression and patient survival.
- To elucidate the molecular mechanism underlying the function of a newly identified lncRNA in NSCLC.
Main Methods:
- Genome-wide lncRNA expression profiling using Affymetrix Gene Chip Human Transcriptome Array 2.0 in 37 paired NSCLC tissues and adjacent nontumorous tissues.
- Validation of lncRNA expression in an additional 93 paired NSCLC samples.
- In vitro and in vivo assays to assess the functional impact of LHFPL3-AS2 on NSCLC cell invasion and metastasis.
- Mechanistic studies involving RNA-protein interactions, promoter binding assays, and gene expression analysis.
Main Results:
- A novel lncRNA, LHFPL3-AS2, was identified and found to be significantly downregulated in NSCLC tissues.
- Low LHFPL3-AS2 expression levels were strongly correlated with advanced TNM stage, metastasis, and poor overall survival in NSCLC patients.
- Overexpression of LHFPL3-AS2 suppressed NSCLC cell invasion and metastasis both in vitro and in vivo.
- Downregulation of LHFPL3-AS2 led to reduced interaction with SFPQ, increased SFPQ binding to the TXNIP promoter, and subsequent transcriptional repression of TXNIP, promoting NSCLC cell migration and invasion.
- LHFPL3-AS2 expression was regulated by EGR1 under hypoxic conditions.
Conclusions:
- LHFPL3-AS2 is a novel tumor suppressor lncRNA in NSCLC, with its downregulation contributing to tumor progression.
- LHFPL3-AS2 exerts its tumor-suppressive function by modulating the SFPQ-TXNIP axis.
- LHFPL3-AS2 may serve as a potential prognostic biomarker and therapeutic target for NSCLC.
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