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Updated: Oct 5, 2025

Single Particle Cryo-Electron Microscopy: From Sample to Structure
Published on: May 29, 2021
Detecting ice artefacts in processed macromolecular diffraction data with machine learning
Kristopher Nolte1, Yunyun Gao1, Sabrina Stäb1
1Institute for Nanostructure and Solid State Physics, University of Hamburg, Luruper Chaussee 149, 22761 Hamburg, Germany.
Abstract:
Contamination with diffraction from ice crystals can negatively affect, or even impede, macromolecular structure determination, and therefore detecting the resulting artefacts in diffraction data is crucial. However, once the data have been processed it can be very difficult to automatically recognize this problem. To address this, a set of convolutional neural networks named Helcaraxe has been developed which can detect ice-diffraction artefacts in processed diffraction data from macromolecular crystals. The networks outperform previous algorithms and will be available as part of the AUSPEX web server and the CCP4-distributed software.
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