m6A-related lncRNAs predict prognosis and indicate immune microenvironment in acute myeloid leukemia

Fangmin Zhong1,2, Fangyi Yao1, Ying Cheng1

  • 1Jiangxi Province Key Laboratory of Laboratory Medicine, Department of Clinical Laboratory, The Second Affiliated Hospital of Nanchang University, No. 1 Minde Road, Nanchang, 330006, Jiangxi, China.

Scientific Reports
|February 3, 2022
PubMed

Insights

This study identifies N6-methyladenosine (m6A)-related long non-coding RNAs (lncRNAs) that predict prognosis in acute myeloid leukemia (AML). A novel risk model using these m6A-related lncRNAs can aid in predicting AML patient survival and guiding immunotherapy strategies.

Area of Science:

  • Hematologic Malignancies
  • Molecular Oncology
  • Cancer Genomics

Background:

  • Acute myeloid leukemia (AML) has a low survival rate, with N6-methyladenosine (m6A) modification and long non-coding RNAs (lncRNAs) implicated in its development.
  • The precise roles of lncRNAs in AML biology and their impact on patient outcomes remain incompletely understood.

Purpose of the Study:

  • To identify m6A-related lncRNAs (m6A-lncRNAs) in AML.
  • To analyze the prognostic value and biological significance of these m6A-lncRNAs.
  • To develop a predictive model for AML patient survival and immune microenvironment characteristics.

Main Methods:

  • Pearson correlation analysis to identify m6A-lncRNAs.
  • Univariate Cox regression for prognostic screening.
  • LASSO regression to build a risk prediction model.
  • Analysis of tumor immune microenvironment (TIME) and clinicopathologic features.
  • Validation of TRAF3IP2-AS1 expression and interaction with SRSF10.

Main Results:

  • Identified m6A-lncRNAs associated with AML prognosis.
  • Developed and validated a risk model based on m6A-lncRNAs for predicting overall survival.
  • Risk scores correlated with AML clinicopathologic features and immune infiltration levels.
  • TRAF3IP2-AS1 expression and its interaction with SRSF10 were observed.

Conclusions:

  • m6A-related lncRNAs offer potential as prognostic biomarkers in AML.
  • The developed risk model can independently predict AML patient survival.
  • These findings may inform the design of targeted immunotherapies for AML.