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Updated: Oct 4, 2025

A Method for Measuring Metabolism in Sorted Subpopulations of Complex Cell Communities Using Stable Isotope Tracing
Published on: February 4, 2017
Spatially resolved isotope tracing reveals tissue metabolic activity
Lin Wang1,2, Xi Xing1, Xianfeng Zeng1
1Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA.
This study introduces iso-imaging, a novel technique to map metabolic activity within organs. It reveals distinct metabolic pathways and nutrient usage in different regions of the kidney and brain.
Area of Science:
- Metabolomics
- Biochemistry
- Physiology
Background:
- Understanding organ-specific metabolic activity is crucial for physiology and disease research.
- Current methods for assessing metabolic heterogeneity within organs are limited.
- Spatially resolved metabolic profiling can uncover regional functional differences.
Purpose of the Study:
- To develop and apply a novel technique for quantitating metabolic activity in mammalian tissues with spatial resolution.
- To investigate metabolic heterogeneity within the kidney and brain using stable-isotope labeling and imaging mass spectrometry.
- To elucidate regional differences in nutrient utilization and metabolic pathways.
Main Methods:
- Coupling stable-isotope-labeled nutrient infusion with matrix-assisted laser desorption ionization imaging mass spectrometry (iso-imaging).
- Spatially resolved quantitation of metabolic flux in kidney and brain tissues.
- Analysis of tricarboxylic acid cycle substrate usage and nitrogen sources.
Main Results:
- Iso-imaging successfully visualized distinct metabolic fluxes (gluconeogenic, glycolytic) in kidney cortex and medulla.
- Differential utilization of glutamine, citrate, and fatty acids was observed across kidney regions.
- Spatial variations in tricarboxylic acid cycle carbon inputs and glutamate metabolism were detected in the brain under different diets.
- Ketogenic diet altered brain metabolism, with 3-hydroxybutyrate contributing differently across brain regions.
- Brain nitrogen sources (ammonia, branched-chain amino acids) showed spatial heterogeneity.
Conclusions:
- Iso-imaging is a powerful tool for revealing the spatial organization of metabolic activity within organs.
- The study demonstrates significant regional metabolic differences in the kidney and brain.
- This technique provides new insights into organ physiology and potential disease mechanisms.
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