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Changes in the Distribution of Respiratory Microorganisms before and during the COVID-19 Pandemic, Daegu, Korea
Background:
Acute respiratory infection (ARI) is the most common infectious disease in all ages and genders worldwide. Respiratory microorganisms such as respiratory viruses, are commonly responsible for causing ARI. COVID-19 is still prevalent in Korea. The implementation of lockdown and strict control measures, the mandatory wearing of masks, and social distancing are critical steps for controlling the risk of COVID-19 spread. This study was conducted to find out how these changes in daily lives impacted the distribution of respiratory microorganisms.
Methods:
A retrospective study was conducted to identify the incidence and distribution patterns of ARI-causing respiratory microorganisms before (Period Ⅰ) and during the COVID-19 pandemic (Period Ⅱ) in terms of detection method, age, month, and season. In particular, data in Periods Ⅰ and Ⅱ were compared for eight major kinds of respiratory microorganisms: adenovirus (AdV), human metapneumovirus (HMPV), human rhinovirus/enterovirus (Rhino/Entero), influenza virus (Flu) A, Flu B, human parainfluenza virus (HPIV) 3, respiratory syncytial virus, and Mycoplasma pneumoniae.
Results:
A total of 27,191 respiratory specimens were tested, of which 5,513 were obtained from children and adolescents (age groups 1 ⁓ 5) and 21,678 from adults (age group 6). The overall positive rates for at least one respiratory microorganism in Periods Ⅰ and Ⅱ were 23.1% (1,199/5,193) and 4.9% (1,070/21,998), respectively (p < 0.001). The overall positive rates in male and female patients were significantly different (8.7% vs. 7.9%; p = 0.016). On the FilmArray™ RP assay, positive rates in all age groups decreased significantly in Period Ⅱ compared with Period Ⅰ. AdV, Rhino/Entero, and Flu A were detected in all four seasons, but HMPV and HPIV3 were not detected. The overall positive rates on FilmArray and the Flu antigen test in Period Ⅱ were significantly decreased. In the COVID-19 test, the positive rates were high in March and April 2020, and decreased thereafter, but these increased again in the winter of 2020/2021.
Conclusions:
Life changes due to COVID-19 pandemic have had a significant impact on the distribution of respiratory microorganisms; our study results might provide useful information on respiratory virus epidemiology.
Insights
COVID-19 pandemic restrictions significantly reduced respiratory microorganism detection rates. Life changes impacted pathogen distribution, offering insights into respiratory virus epidemiology.
Area of Science:
- Infectious Disease Epidemiology
- Microbiology
- Public Health
Background:
- Acute respiratory infections (ARIs) are globally prevalent, often caused by respiratory viruses.
- COVID-19 pandemic necessitated public health interventions like lockdowns, mask mandates, and social distancing.
- These measures aimed to control viral spread but potentially altered the epidemiology of other respiratory pathogens.
Purpose of the Study:
- To investigate the impact of COVID-19 pandemic control measures on the incidence and distribution of ARI-causing microorganisms.
- To compare the prevalence of specific respiratory pathogens before and during the pandemic.
- To analyze changes in pathogen detection across different demographics, seasons, and detection methods.
Main Methods:
- A retrospective study comparing data from before (Period I) and during (Period II) the COVID-19 pandemic.
- Analysis of 27,191 respiratory specimens, focusing on eight major respiratory microorganisms.
- Comparison of detection rates across age groups, months, seasons, and using different assays (FilmArray™ RP, Flu antigen test).
Main Results:
- Overall positive rates for respiratory microorganisms significantly decreased from 23.1% in Period I to 4.9% in Period II (p < 0.001).
- Detection rates declined across all age groups during Period II compared to Period I.
- Adenovirus, Rhinovirus/Enterovirus, and Influenza A were detected year-round, while HMPV and HPIV3 were not detected in Period II.
Conclusions:
- The COVID-19 pandemic and associated lifestyle changes profoundly affected the distribution of respiratory microorganisms.
- The study provides valuable epidemiological data on respiratory viruses during a global health crisis.
- Findings highlight the dynamic nature of infectious disease patterns in response to public health interventions.
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