Functional genetic dropout screens and in vivo validation of candidate therapeutic targets using mouse mammary tumoroids
Related Experiment Video
Updated: Oct 4, 2025

Author Spotlight: Finding New Therapeutic Targets for Malignant Peripheral Nerve Sheath Tumor Through Genome-Scale shRNA Screens
Published on: August 25, 2023
Mariana Paes Dias1,2, Sven Rottenberg1,3, Jos Jonkers1,2
1Division of Molecular Pathology, the Netherlands Cancer Institute, 1066CX Amsterdam, the Netherlands.
Abstract:
We have previously developed 3D tumoroids derived from genetically engineered mouse models (GEMMs) of BRCA1/2-deficient breast cancer. Here, we describe how to genetically modify tumoroids, use them for functional genetic dropout screens, and carry out orthotopic transplantation of modified tumoroids. The purpose of this protocol is to screen for therapeutic targets and allow rapid and straightforward in vivo validation of the candidate targets. For complete details on the use and execution of this protocol, please refer to Paes Dias et al. (2021b).
Insights
This study details a protocol for genetically modifying 3D tumoroids from BRCA1/2-deficient breast cancer mouse models. These modified tumoroids enable functional genetic screens and in vivo validation of therapeutic targets.
Area of Science:
- Oncology
- Genetics
- Biotechnology
Background:
- BRCA1/2-deficient breast cancer poses a significant therapeutic challenge.
- Three-dimensional (3D) tumoroids derived from genetically engineered mouse models (GEMMs) offer a promising preclinical platform.
- Existing methods lack efficient genetic manipulation and in vivo validation strategies for these tumoroids.
Purpose of the Study:
- To present a comprehensive protocol for genetic modification of BRCA1/2-deficient breast cancer tumoroids.
- To enable functional genetic dropout screens using these modified tumoroids.
- To facilitate rapid and straightforward in vivo validation of potential therapeutic targets identified through screening.
Main Methods:
- Development of genetically engineered mouse models (GEMMs) for BRCA1/2-deficient breast cancer.
- Establishment and genetic modification of 3D tumoroids derived from GEMMs.
- Execution of functional genetic dropout screens within the modified tumoroids.
- Orthotopic transplantation of modified tumoroids for in vivo studies.
Main Results:
- The protocol successfully allows for genetic modification of 3D tumoroids.
- Functional genetic dropout screens can be effectively performed using the modified tumoroids.
- Orthotopic transplantation enables robust in vivo validation of candidate therapeutic targets.
Conclusions:
- This protocol provides a powerful tool for identifying and validating therapeutic targets in BRCA1/2-deficient breast cancer.
- The described methodology accelerates the drug discovery and development pipeline for this disease.
- The 3D tumoroid system combined with genetic screening and in vivo validation offers a significant advancement in preclinical cancer research.
Related Concept Videos
In-vitro Mutagenesis
Mouse Models of Cancer Study
The development of transgenic, knockout, and knock-in mice has led to an exponential increase in their use as model organisms in research,...

