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Published on: September 26, 2018
Actionable absolute risk prediction of atherosclerotic cardiovascular disease based on the UK Biobank
Ajay Kesar1, Adel Baluch1, Omer Barber1
1Ada Health GmbH, Berlin, Germany.
Insights
New models accurately predict 10-year atherosclerotic cardiovascular disease (CVD) risk using extensive data and lifestyle factors. These advanced tools outperform existing methods, offering personalized, actionable insights for preventive cardiology and public health.
Area of Science:
- Cardiology and Public Health
- Biostatistics and Machine Learning
Background:
- Cardiovascular diseases (CVDs) are the leading global cause of death.
- Current risk prediction models for atherosclerotic CVD have limitations, including narrow factor consideration, lack of actionable advice, and outdated data.
- Lifestyle significantly influences atherosclerotic CVD risk, highlighting the need for improved, personalized prediction tools.
Purpose of the Study:
- To develop and benchmark data preprocessing and algorithms for predicting absolute 10-year atherosclerotic CVD risk.
- To create more accurate, interpretable, and actionable risk prediction models compared to existing standards like Framingham and QRisk3.
Main Methods:
- Utilized a large dataset of 464,547 UK Biobank participants without baseline atherosclerotic CVD.
- Employed a comprehensive set of 203 consolidated risk factors and machine learning algorithms.
- Benchmarked various models to identify optimal data preprocessing and algorithms for risk prediction.
Main Results:
- Developed two high-performing atherosclerotic CVD risk prediction models with AUROC scores of 0.7573 and 0.7544, surpassing Framingham (0.680) and QRisk3 (0.725).
- A reduced model using 25 selected features achieved comparable performance (AUROC 0.7415) with increased simplicity, interpretability, and generalizability.
- The best models demonstrated superior predictive accuracy for 10-year atherosclerotic CVD risk.
Conclusions:
- The developed models offer significant improvements in predicting absolute 10-year atherosclerotic CVD risk.
- The interpretable and actionable reduced model holds potential for integration into clinical practice for personalized risk assessment and intervention suggestions.
- These advancements can enhance preventive cardiology efforts and public health strategies for managing cardiovascular disease.
Abstract:
Cardiovascular diseases (CVDs) are the primary cause of all death globally. Timely and accurate identification of people at risk of developing an atherosclerotic CVD and its sequelae is a central pillar of preventive cardiology. One widely used approach is risk prediction models; however, currently available models consider only a limited set of risk factors and outcomes, yield no actionable advice to individuals based on their holistic medical state and lifestyle, are often not interpretable, were built with small cohort sizes or are based on lifestyle data from the 1960s, e.g. the Framingham model. The risk of developing atherosclerotic CVDs is heavily lifestyle dependent, potentially making many occurrences preventable. Providing actionable and accurate risk prediction tools to the public could assist in atherosclerotic CVD prevention. Accordingly, we developed a benchmarking pipeline to find the best set of data preprocessing and algorithms to predict absolute 10-year atherosclerotic CVD risk. Based on the data of 464,547 UK Biobank participants without atherosclerotic CVD at baseline, we used a comprehensive set of 203 consolidated risk factors associated with atherosclerosis and its sequelae (e.g. heart failure). Our two best performing absolute atherosclerotic risk prediction models provided higher performance, (AUROC: 0.7573, 95% CI: 0.755-0.7595) and (AUROC: 0.7544, 95% CI: 0.7522-0.7567), than Framingham (AUROC: 0.680, 95% CI: 0.6775-0.6824) and QRisk3 (AUROC: 0.725, 95% CI: 0.7226-0.7273). Using a subset of 25 risk factors identified with feature selection, our reduced model achieves similar performance (AUROC 0.7415, 95% CI: 0.7392-0.7438) while being less complex. Further, it is interpretable, actionable and highly generalizable. The model could be incorporated into clinical practice and might allow continuous personalized predictions with automated intervention suggestions.
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