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Published on: July 24, 2017
Diffusion time dependence, power-law scaling, and exchange in gray matter
Jonas L Olesen1, Leif Østergaard2, Noam Shemesh3
1Center of Functionally Integrative Neuroscience (CFIN) and MINDLab, Department of Clinical Medicine, Aarhus University, Aarhus, Denmark; Department of Physics and Astronomy, Aarhus University, Aarhus, Denmark.
Abstract:
Characterizing neural tissue microstructure is a critical goal for future neuroimaging. Diffusion MRI (dMRI) provides contrasts that reflect diffusing spins' interactions with myriad microstructural features of biological systems. However, the specificity of dMRI remains limited due to the ambiguity of its signals vis-à-vis the underlying microstructure. To improve specificity, biophysical models of white matter (WM) typically express dMRI signals according to the Standard Model (SM) and have more recently in gray matter (GM) taken spherical compartments into account (the SANDI model) in attempts to represent cell soma. The validity of the assumptions underlying these models, however, remains largely undetermined, especially in GM. To validate these assumptions experimentally, observing their unique, functional properties, such as the b-1/2 power-law associated with one-dimensional diffusion, has emerged as a fruitful strategy. The absence of this signature in GM, in turn, has been explained by neurite water exchange, non-linear morphology, and/or by obscuring soma signal contributions. Here, we present diffusion simulations in realistic neurons demonstrating that curvature and branching does not destroy the stick power-law behavior in impermeable neurites, but also that their signal is drowned by the soma signal under typical experimental conditions. Nevertheless, by studying the GM dMRI signal's behavior as a function of diffusion weighting as well as time, we identify an attainable experimental regime in which the neurite signal dominates. Furthermore, we find that exchange-driven time dependence produces a signal behavior opposite to that which would be expected from restricted diffusion, thereby providing a functional signature that disambiguates the two effects. We present data from dMRI experiments in ex vivo rat brain at ultrahigh field of 16.4T and observe a time dependence that is consistent with substantial exchange but also with a GM stick power-law. The first finding suggests significant water exchange between neurites and the extracellular space while the second suggests a small sub-population of impermeable neurites. To quantify these observations, we harness the Kärger exchange model and incorporate the corresponding signal time dependence in the SM and SANDI models.
Insights
Diffusion MRI (dMRI) signals in gray matter are complex. This study shows neurite signals can be isolated and characterized, revealing insights into water exchange and impermeable neurites using advanced modeling and ultrahigh field imaging.
Area of Science:
- Neuroimaging
- Biophysics
- Diffusion MRI
Background:
- Diffusion MRI (dMRI) is crucial for neuroimaging but signal specificity is limited, especially in gray matter (GM).
- Current biophysical models like the Standard Model (SM) and SANDI model have assumptions that need experimental validation in GM.
- The b⁻¹/² power-law is a key signature of 1D diffusion, but its absence in GM is attributed to factors like water exchange and soma signals.
Purpose of the Study:
- To experimentally validate assumptions of dMRI biophysical models in gray matter.
- To identify conditions where neurite signals dominate in GM dMRI.
- To differentiate between water exchange and restricted diffusion effects in GM.
Main Methods:
- Diffusion simulations in realistic neuron models.
- Analysis of GM dMRI signal behavior across diffusion weighting and time.
- Ultrahigh field (16.4T) dMRI experiments on ex vivo rat brain.
- Application of the Kärger exchange model and integration into SM and SANDI models.
Main Results:
- Neurite signals in simulations are masked by soma signals under typical conditions but can be isolated experimentally.
- Neurite signals in impermeable structures exhibit a power-law behavior, even with curvature and branching.
- Observed time dependence in GM dMRI data suggests significant water exchange and a sub-population of impermeable neurites.
- Exchange-driven time dependence mimics restricted diffusion, necessitating careful interpretation.
Conclusions:
- The study identifies an experimental regime to isolate neurite signals in GM dMRI.
- Findings suggest substantial water exchange and a small population of impermeable neurites in GM.
- The Kärger exchange model, integrated into SM and SANDI, aids in quantifying these GM microstructural properties.
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