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A Multiwell-Plate Caenorhabditis elegans Assay for Assessing the Therapeutic Potential of Bacteriophages against
Prasanth Manohar1,2, Belinda Loh1, Namasivayam Elangovan3
1Zhejiang University-University of Edinburgh (ZJE) Institute, Zhejiang University, School of Medicine, Haining, Zhejiang, People's Republic of China.
Abstract:
In order to establish phage therapy as a standard clinical treatment for bacterial infections, testing of every phage to ensure the suitability and safety of the biological compound is required. While some issues have been addressed over recent years, standard and easy-to-use animal models to test phages are still rare. Testing of phages in highly suitable mammalian models such as mice is subjected to strict ethical regulations, while insect larvae such as the Galleria mellonella model suffer from batch-to-batch variations and require manual operator skills to inject bacteria, resulting in unreliable experimental outcomes. A much simpler model is the nematode Caenorhabditis elegans, which feeds on bacteria, a fast growing and easy to handle organism that can be used in high-throughput screening. In this study, two clinical bacterial strains of Escherichia coli, one Klebsiella pneumoniae, and one Enterobacter cloacae strain were tested on the model system together with lytic bacteriophages that we isolated previously. We developed a liquid-based assay, in which the efficiency of phage treatment was evaluated using a scoring system based on microscopy and counting of the nematodes, allowing increasing statistical significance compared to other assays such as larvae or mice. Our work demonstrates the potential to use Caenorhabditis elegans to test the virulence of strains of Klebsiella pneumoniae, Enterobacter cloacae, and EHEC/EPEC as well as the efficacy of bacteriophages to treat or prevent infections, allowing a more reliable evaluation for the clinical therapeutic potential of lytic phages. IMPORTANCE Validating the efficacy and safety of phages prior to clinical application is crucial to see phage therapy in practice. Current animal models include mice and insect larvae, which pose ethical or technical challenges. This study examined the use of the nematode model organism C. elegans as a quick, reliable, and simple alternative for testing phages. The data show that all the four tested bacteriophages can eliminate bacterial pathogens and protect the nematode from infections. Survival rates of the nematodes increased from <20% in the infection group to >90% in the phage treatment group. Even the nematodes with poly-microbial infections recovered during phage cocktail treatment. The use of C. elegans as a simple whole-animal infection model is a rapid and robust way to study the efficacy of phages before testing them on more complex model animals such as mice.
Insights
Caenorhabditis elegans offers a simple, reliable model for testing bacteriophages against bacterial infections. This nematode model effectively evaluates phage efficacy, increasing survival rates from less than 20% to over 90% in treated infections.
Area of Science:
- Microbiology and Virology
- Infectious Diseases
- Model Organism Research
Background:
- Phage therapy requires rigorous testing for clinical application, but current animal models (mice, insect larvae) present ethical or technical challenges.
- Standardized, easy-to-use models are needed to evaluate bacteriophage efficacy and safety for treating bacterial infections.
- Existing models like mice are ethically restricted, while insect larvae (e.g., Galleria mellonella) show variability and require manual intervention.
Purpose of the Study:
- To evaluate Caenorhabditis elegans as a simple, high-throughput model for testing bacteriophage efficacy against bacterial pathogens.
- To assess the reliability of C. elegans in determining the therapeutic potential of lytic bacteriophages for clinical use.
- To compare the effectiveness of bacteriophages against specific bacterial strains (Escherichia coli, Klebsiella pneumoniae, Enterobacter cloacae) using the nematode model.
Main Methods:
- Developed a liquid-based assay using Caenorhabditis elegans to model bacterial infections.
- Tested four clinical bacterial strains (two E. coli, one K. pneumoniae, one E. cloacae) and isolated lytic bacteriophages.
- Utilized a microscopy-based scoring system to quantify nematode survival and evaluate phage treatment efficiency.
Main Results:
- Caenorhabditis elegans successfully modeled infections by E. coli, K. pneumoniae, and E. cloacae.
- All tested bacteriophages demonstrated efficacy in eliminating bacterial pathogens and protecting nematodes, increasing survival rates from <20% to >90%.
- The nematode model showed effectiveness even with poly-microbial infections, with phage cocktails improving recovery.
Conclusions:
- Caenorhabditis elegans serves as a rapid, robust, and simple whole-animal model for assessing bacteriophage efficacy against bacterial infections.
- This model provides a reliable platform for evaluating the clinical therapeutic potential of lytic phages before progression to more complex animal studies.
- The C. elegans model facilitates high-throughput screening and increases statistical significance for phage therapy research.

