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Updated: Oct 3, 2025

Measurements of Physiological Stress Responses in C. Elegans
Published on: May 21, 2020
Loss of ubiquitinated protein autophagy is compensated by persistent cnc/NFE2L2/Nrf2 antioxidant responses
Arindam Bhattacharjee1, Adél Ürmösi1,2, András Jipa1
1Institute of Genetics; Biological Research Centre; Szeged, Hungary.
Abstract:
SQSTM1/p62-type selective macroautophagy/autophagy receptors cross-link poly-ubiquitinated cargo and autophagosomal LC3/Atg8 proteins to deliver them for lysosomal degradation. Consequently, loss of autophagy leads to accumulation of polyubiquitinated protein aggregates that are also frequently seen in various human diseases, but their physiological relevance is incompletely understood. Here, using a genetically non-redundant Drosophila model, we show that specific disruption of ubiquitinated protein autophagy and concomitant formation of polyubiquitinated aggregates has hardly any effect on bulk autophagy, proteasome activity and fly healthspan. We find that accumulation of ref(2)P/SQSTM1 due to a mutation that disrupts its binding to Atg8a results in the co-sequestering of Keap1 and thus activates the cnc/NFE2L2/Nrf2 antioxidant pathway. These mutant flies have increased tolerance to oxidative stress and reduced levels of aging-associated mitochondrial superoxide. Interestingly, ubiquitin overexpression in ref(2)P point mutants prevents the formation of large aggregates and restores the cargo recognition ability of ref(2)P, although it does not prevent the activation of antioxidant responses. Taken together, potential detrimental effects of impaired ubiquitinated protein autophagy are compensated by the aggregation-induced antioxidant response.Abbreviations: Atg8a: Autophagy-related 8a; cnc: cap-n-collar; IFM: indirect flight muscle; KEAP1: kelch like ECH associated protein 1; LIR: LC3-interacting region; NFE2L2/Nrf2: NFE2 like bZIP transcription factor 2; PB1: Phox and Bem1; ref(2)P: refractory to sigma P; SAR: selective autophagy receptor; UBA: ubiquitin-associated.
Insights
Selective autophagy receptors link ubiquitinated proteins for degradation. Disrupting this in flies surprisingly activates antioxidant pathways, suggesting aggregation-induced responses compensate for impaired protein clearance.
Area of Science:
- Cell Biology
- Molecular Biology
- Genetics
Background:
- Selective autophagy receptors (SARs) like SQSTM1/p62 are crucial for degrading poly-ubiquitinated protein aggregates by linking them to LC3/Atg8 proteins.
- The physiological significance of poly-ubiquitinated aggregate accumulation, often observed in human diseases, due to impaired autophagy remains unclear.
Purpose of the Study:
- To investigate the physiological relevance of ubiquitinated protein autophagy and the consequences of its disruption in a genetically defined model system.
- To elucidate the mechanisms underlying the accumulation of poly-ubiquitinated aggregates and their impact on cellular pathways.
Main Methods:
- Utilized a genetically non-redundant *Drosophila* model to specifically disrupt ubiquitinated protein autophagy.
- Analyzed the effects on bulk autophagy, proteasome activity, healthspan, and the activation of the cap-n-collar/NFE2L2/Nrf2 (cnc/NFE2L2/Nrf2) antioxidant pathway.
Main Results:
- Specific disruption of ubiquitinated protein autophagy and aggregate formation had minimal impact on bulk autophagy, proteasome activity, and fly healthspan.
- A mutation disrupting the binding of ref(2)P/SQSTM1 to Atg8a led to Keap1 sequestration, activating the cnc/NFE2L2/Nrf2 antioxidant pathway.
- Mutant flies exhibited increased oxidative stress tolerance and reduced aging-associated mitochondrial superoxide levels.
- Ubiquitin overexpression in ref(2)P mutants prevented large aggregate formation and restored cargo recognition but did not abolish antioxidant response activation.
Conclusions:
- Impaired ubiquitinated protein autophagy can be compensated by an aggregation-induced antioxidant response, mitigating potential detrimental effects.
- The study highlights a novel compensatory mechanism involving the activation of antioxidant pathways in response to disrupted selective autophagy.
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