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Rapid Detection of the Recently Identified Turfgrass Pathogen Magnaporthiopsis meyeri-festucae Using Recombinase
Ming-Yi Chou1, Jing Luo2, Bruce B Clarke2
1Department of Plant Pathology, University of Wisconsin-Madison, Madison, WI 53706.
Abstract:
Magnaporthiopsis meyeri-festucae is a recently identified root-infecting pathogen of fine fescue (Festuca spp.) turfgrasses. Although it is phylogenetically similar to other root-infecting turfgrass pathogens such as M. poae, management of M. meyeri-festucae is distinct and highlights the need for fast and accurate identification. The objective of this study was to develop a rapid detection method for M. meyeri-festucae using recombinase polymerase amplification (RPA) to assist turfgrass managers in identifying the disease in the field and facilitate further epidemiological research on the pathogen. Three isolates of M. meyeri-festucae and eight isolates from four related Magnaporthiopsis species were used to test the specificity of the RPA assay targeting M. meyeri-festucae. Rapid visualization of the RPA assay results using a mixture of purified amplicon and SYBR-Safe fluorescence emitting asymmetrical cyanine dye showed that the assay was effective at detecting M. meyeri-festucae on turfgrass roots with no observed incidence of false positives or false negatives. The assay also differentiated between M. meyeri-festucae and other Magnaporthiopsis species, although overall sensitivity was lower compared with a PCR-based method. The RPA assay successfully detected M. meyeri-festucae following inoculation onto and grinding of turfgrass roots, indicating possible use as a rapid field diagnostic tool for turfgrass managers. The fast and accurate RPA M. meyeri-festucae detection method presented here will be used for additional field and laboratory applications that will help improve the management of this emerging pathogen.
Insights
A new rapid detection method for Magnaporthiopsis meyeri-festucae, a turfgrass pathogen, was developed using recombinase polymerase amplification (RPA). This assay aids turfgrass managers in quick field identification and management of this emerging disease.
Area of Science:
- Plant Pathology
- Molecular Diagnostics
- Turfgrass Science
Background:
- Magnaporthiopsis meyeri-festucae is an emerging root-infecting pathogen affecting fine fescue turfgrass.
- Accurate and rapid identification is crucial for effective management due to its distinct characteristics compared to related pathogens like M. poae.
- Current diagnostic methods may not be suitable for rapid field application.
Purpose of the Study:
- To develop a rapid detection method for Magnaporthiopsis meyeri-festucae using recombinase polymerase amplification (RPA).
- To provide turfgrass managers with a tool for quick in-field identification.
- To facilitate further epidemiological research on M. meyeri-festucae.
Main Methods:
- Developed and tested a recombinase polymerase amplification (RPA) assay targeting M. meyeri-festucae.
- Evaluated assay specificity using three M. meyeri-festucae isolates and eight isolates from four related Magnaporthiopsis species.
- Visualized RPA results using SYBR-Safe dye for rapid detection on turfgrass roots, including samples subjected to inoculation and grinding.
Main Results:
- The RPA assay effectively detected M. meyeri-festucae on turfgrass roots with no false positives or negatives.
- The assay demonstrated specificity, differentiating M. meyeri-festucae from other Magnaporthiopsis species, though sensitivity was lower than PCR.
- Successful detection after direct inoculation and grinding of roots indicates potential for rapid field diagnostics.
Conclusions:
- A fast and accurate RPA-based detection method for M. meyeri-festucae has been successfully developed.
- This method holds significant potential as a rapid field diagnostic tool for turfgrass managers.
- The assay will support improved management strategies and further research on this emerging turfgrass pathogen.
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