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Updated: Oct 2, 2025

Purification of Ubiquitinated p53 Proteins from Mammalian Cells
Published on: March 21, 2022
Regulation of p53 Function by Formation of Non-Nuclear Heterologous Protein Complexes
Lev Zavileyskiy1, Victoria Bunik1,2,3
1Faculty of Bioengineering and Bioinformatics, Lomonosov Moscow State University, 119991 Moscow, Russia.
Abstract:
A transcription factor p53 is activated upon cellular exposure to endogenous and exogenous stresses, triggering either homeostatic correction or cell death. Depending on the stress level, often measurable as DNA damage, the dual outcome is supported by p53 binding to a number of regulatory and metabolic proteins. Apart from the nucleus, p53 localizes to mitochondria, endoplasmic reticulum and cytosol. We consider non-nuclear heterologous protein complexes of p53, their structural determinants, regulatory post-translational modifications and the role in intricate p53 functions. The p53 heterologous complexes regulate the folding, trafficking and/or action of interacting partners in cellular compartments. Some of them mainly sequester p53 (HSP proteins, G6PD, LONP1) or its partners (RRM2B, PRKN) in specific locations. Formation of other complexes (with ATP2A2, ATP5PO, BAX, BCL2L1, CHCHD4, PPIF, POLG, SOD2, SSBP1, TFAM) depends on p53 upregulation according to the stress level. The p53 complexes with SIRT2, MUL1, USP7, TXN, PIN1 and PPIF control regulation of p53 function through post-translational modifications, such as lysine acetylation or ubiquitination, cysteine/cystine redox transformation and peptidyl-prolyl cis-trans isomerization. Redox sensitivity of p53 functions is supported by (i) thioredoxin-dependent reduction of p53 disulfides, (ii) inhibition of the thioredoxin-dependent deoxyribonucleotide synthesis by p53 binding to RRM2B and (iii) changed intracellular distribution of p53 through its oxidation by CHCHD4 in the mitochondrial intermembrane space. Increasing knowledge on the structure, function and (patho)physiological significance of the p53 heterologous complexes will enable a fine tuning of the settings-dependent p53 programs, using small molecule regulators of specific protein-protein interactions of p53.
Insights
The tumor suppressor p53 protein forms complexes outside the nucleus, influencing cellular stress responses and functions. Understanding these p53 complexes offers new therapeutic targets for fine-tuning cellular programs.
Area of Science:
- Cell Biology
- Molecular Biology
- Biochemistry
Background:
- The transcription factor p53 is a crucial stress-response protein.
- p53's functions are modulated by interactions with various proteins.
- p53 is found in multiple cellular compartments beyond the nucleus.
Purpose of the Study:
- To investigate non-nuclear p53 heterologous protein complexes.
- To explore the structural determinants and post-translational modifications of these complexes.
- To elucidate the role of these complexes in p53's intricate functions.
Main Methods:
- Analysis of p53 protein-protein interactions in various cellular compartments.
- Characterization of structural and regulatory aspects of p53 complexes.
- Investigation of p53 complex involvement in cellular stress responses and redox regulation.
Main Results:
- Identified numerous non-nuclear p53 complexes with regulatory and metabolic proteins.
- Demonstrated that some complexes sequester p53 or its partners, while others form upon p53 upregulation.
- Highlighted the role of specific complexes in regulating p53's post-translational modifications and redox sensitivity.
Conclusions:
- Non-nuclear p53 complexes significantly contribute to cellular stress management and p53 regulation.
- Understanding these complexes provides insights into p53's diverse roles.
- Targeting p53 protein-protein interactions could lead to novel therapeutic strategies.
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