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Early Prediction of Sepsis Onset Using Neural Architecture Search Based on Genetic Algorithms.

Jae Kwan Kim1,2, Wonbin Ahn3, Sangin Park1

  • 1Center for Bionics, Korea Institute of Science and Technology, Seoul 02792, Korea.

International Journal of Environmental Research and Public Health
|February 25, 2022
PubMed
Summary

This study introduces a novel neural architecture search (NAS) model using a genetic algorithm (GA) for early sepsis prediction. The model achieves high accuracy in predicting sepsis onset, significantly outperforming existing scoring systems.

Keywords:
genetic algorithmintensive care unitneural architecture searchsepsis

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Area of Science:

  • * Computational biology and medical informatics.
  • * Development of advanced machine learning models for healthcare.

Background:

  • * Sepsis presents a critical threat to patient survival, necessitating effective early detection strategies.
  • * Current prediction methods often lack the required speed and accuracy for timely intervention.

Purpose of the Study:

  • * To develop and evaluate a computationally efficient neural architecture search (NAS) model for predicting sepsis onset.
  • * To assess the model's performance across various prediction timeframes using real-world clinical data.

Main Methods:

  • * Implementation of a novel NAS model integrated with a genetic algorithm (GA) for optimized neural network architecture discovery.
  • * Weight sharing across internal network connections and genotypes to reduce computational search cost.
  • * Validation using the Medical Information Mart for Intensive Care III (MIMIC-III) time-series dataset.

Main Results:

  • * Achieved an Area Under the Receiver Operating Characteristic Curve (AUROC) of 0.94 for 3-hour sepsis onset prediction.
  • * Demonstrated superior performance compared to SOFA, qSOFA, and SAPS II scoring systems (0.31-0.26 higher AUROC).
  • * Outperformed a standard long short-term memory (LSTM) model by 12% in AUROC and showed robustness to input data variations.

Conclusions:

  • * The proposed NAS-GA model offers a highly effective and computationally efficient approach for early sepsis prediction.
  • * This method significantly enhances predictive accuracy over conventional clinical scoring systems and baseline deep learning models.
  • * The model's robustness and performance make it a promising tool for improving sepsis patient outcomes.