Related Experiment Video
Updated: Oct 2, 2025

08:58
Characterization of Glycoproteins with the Immunoglobulin Fold by X-Ray Crystallography and Biophysical Techniques
Published on: July 5, 2018
12.8K
Structure and Carbohydrate Recognition by the Nonmitogenic Lectin Horcolin
Vaishali Narayanan1, Kishore Babu Bobbili1, Nukathoti Sivaji1
1Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560 012, India.
Biochemistry
|February 28, 2022
Summary
Horcolin, a nonmitogenic lectin, binds HIV-1 gp120 and neutralizes the virus. Structural analysis reveals two distinct carbohydrate-binding sites, suggesting allosteric communication crucial for antiviral activity against HIV-1.
Area of Science:
- Structural biology
- Biochemistry
- Virology
Background:
- Lectins show antiviral promise by targeting viral glycoproteins like HIV-1's gp120.
- Mitogenicity of some lectins limits their therapeutic use.
- Horcolin, a jacalin lectin, binds gp120 and neutralizes HIV-1 without being mitogenic.
Purpose of the Study:
- To elucidate the atomic-resolution structure of horcolin.
- To understand the molecular basis of horcolin's carbohydrate recognition.
- To investigate the structural basis for horcolin's nonmitogenic and antiviral properties.
Main Methods:
- X-ray crystallography for high-resolution structural determination.
- NMR spectroscopy for studying molecular interactions and binding dynamics.
- Site-directed mutagenesis to create single-binding-site variants.
Main Results:
- Horcolin dimer possesses a beta-prism I fold with two distinct carbohydrate-binding sites.
- Carbohydrate binding is stabilized by hydrogen bonds to conserved residues.
- NMR revealed a two-site binding mode with differing affinities and suggested allosteric communication between sites.
Conclusions:
- Horcolin's structure provides atomic insights into its nonmitogenic antiviral mechanism.
- The identified carbohydrate-binding sites and their allosteric communication are key to horcolin's interaction with viral glycans.
- Horcolin represents a promising lectin-based therapeutic candidate for HIV-1 treatment.
Related Concept Videos
Selectins
3.5K
Cell adhesion is an essential aspect of multicellularity. While stable cell interactions usually occur between cells of the same type, transient cell interactions occur between cells of different tissue types, such as between neutrophils and endothelial cells. Selectins are one class of cell adhesion molecules (CAMs) that bind carbohydrate ligands to form transient cell adhesion. They are rod-like proteins with a long extracellular part of variable length ending with the lectin domain,...
3.5K
Chemistry of Carbohydrates
78.2K
Carbohydrates are an essential part of the diet in humans and animals. Grains, fruits, and vegetables are natural sources of carbohydrates that provide energy to the body, particularly through glucose, a simple sugar that is a component of starch and an ingredient in many staple foods. The stoichiometric formula (CH2O)n, where n is the number of carbons in the molecule represents carbohydrates. In other words, the ratio of carbon to hydrogen to oxygen is 1:2:1 in carbohydrate molecules. This...
78.2K
Membrane Carbohydrates
6.1K
The plasma membrane is a dynamic barrier composed of lipids, proteins, and carbohydrates. It is the epicenter of many cellular processes required for cell growth and survival. Carbohydrates have unique structural and chemical properties that help the plasma membrane to carry out its functions effectively.
Membrane carbohydrates do not have any hydrophobic region and are exclusively located on the cell's outer surface. The addition of sugar molecules or glycosylation of proteins happens in...
Membrane carbohydrates do not have any hydrophobic region and are exclusively located on the cell's outer surface. The addition of sugar molecules or glycosylation of proteins happens in...
6.1K
Oligosaccharide Assembly
3.0K
Protein glycosylation starts in the ER lumen and continues in the Golgi apparatus. Glycosyltransferases catalyze the addition of sugar molecules or glycosylation of proteins. Usually, these enzymes add sugars to the hydroxyl groups of selected serine or threonine residues to form O-linked glycans or the amino groups of asparagine residues to form N-linked glycans. Different positions on the same polypeptide chain can contain differently linked glycans.
Multiple sugar molecules that may or may...
Multiple sugar molecules that may or may...
3.0K
Structure of Cadherins
3.6K
The cadherins were one of the first cell adhesion molecules discovered; the term “cadherins” is based on their calcium-dependent adhering properties. The first cadherins discovered on the epithelial, neuronal, and placental cells were named E-cadherin, P-cadherin, and N-cadherin, respectively. These classical cadherins share sequence and structural similarities. Other cadherins, including those involved in cell signaling, are grouped into non-classical cadherins. This...
3.6K
Glycocalyx and its Functions
6.3K
The glycocalyx is a carbohydrate-rich, fuzzy-appearing layer on the outer surface of the cell membrane. It is highly hydrophilic, because of this it attracts large amounts of water to the cell's surface. This aids the cell's interaction with the watery environment and also helps it to obtain substances dissolved in the water. It is also important for cell identification, self/non-self determination, and embryonic development and is used in cell-to-cell attachments to form tissues.
6.3K

