Related Experiment Video
Updated: Oct 1, 2025

Conventional BODIPY Conjugates for Live-Cell Super-Resolution Microscopy and Single-Molecule Tracking
Published on: June 8, 2020
Hetero-Substituted αβ-Fused BODIPY
Fabien Ceugniet1, Quentin Huaulmé1, Alexandra Sutter1
1Institut de Chimie et Procédés pour l'Énergie l'Environnement et la Santé (ICPEES), UMR CNRS 7515 École Européenne de Chimie, Polymères et Matériaux (ECPM), 25 Rue Becquerel, 67087, Strasbourg Cedex 02, France.
Abstract:
Here, we report the synthesis and properties of heterosubtituted αβ-fused BODIPY fluorophores. The compounds were obtained in good yields by sequential and selective Stille cross-coupling reactions from 2,3,5,6-tetrahalo-BODIPY, allowing the introduction of different substituents at the 3,5 and 2,6 positions of the BODIPY ring. The final fused compounds were synthesized using oxidative cyclisation with ferrous chloride. The fully fused compounds show a strong bathochromically shifted emission along with a hyperchromic shift of the absorption maxima. The fluorescence quantum yields remain relatively large for compounds emitting in this wavelength range. Computational studies have been carried out to fully understand the photophysical behaviour of these dyes.
Related Concept Videos
¹H NMR Chemical Shift Equivalence: Homotopic and Heterotopic Protons
¹H NMR: Pople Notation
A proton...
Labeling DNA Probes
Radioisotopes, fluorophores, or small molecule binding partners like biotin or digoxigenin, are the most widely used reporter tags for labeling DNA probes. These labels can be attached to the probe DNA molecule via...

