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Published on: February 23, 2024
In silico evaluation of Vitis amurensis Rupr. Polyphenol compounds for their inhibition potency against COVID-19 main
Imen Souid1,2, Atef Korchef3, Safouan Souid4
1Campus for Girls Study, Pre-Medical Department, College of Sciences, King Khalid University, Box 3340, Abha, Saudi Arabia.
Abstract:
The rapid transmission of the pneumonia (COVID-19) emerged as an entire worldwide health concern and it was declared as pandemic by the World Health Organization (WHO) as a consequence of the increasing reported infections number. COVID-19 disease is caused by the novel SARS-CoV-2 virus, and unfortunatly no drugs are currently approved against this desease. Accordingly, it is of outmost importance to review the possible therapeutic effects of naturally-occuring compounds that showed approved antiviral activities. The molecular docking approach offers a rapid prediction of a possible inhibition of the main enzymes Mpro and RdRp that play crucial role in the SARS-CoV-2 replication and transcription. In the present work, we review the anti-viral activities of polyphenol compounds (phenolic acids, flavonoids and stilbene) derived from the traditional Chinese medicinal Vitis amurensis. Recent molecular docking studies reported the possible binding of these polyphenols on SARS-CoV-2 enzymes Mpro and RdRp active sites and showed interesting inhibitory effects. This antiviral activity was explained by the structure-activity relationships of the studied compounds. Also, pharmacokinetic analysis of the studied molecules is simulated in the present work. Among the studied polyphenol compounds, only five, namely caffeic acid, ferulic acid, quercetin, naringenin and catechin have drug-likeness characteristics. These five polyphenols derived from Vitis amurensis are promising drug candidates for the COVID-19 treatment.
Insights
Polyphenols from Vitis amurensis show potential as COVID-19 treatments. Molecular docking suggests these compounds can inhibit SARS-CoV-2 replication enzymes, with five identified as promising drug candidates.
Area of Science:
- * Pharmacology
- * Medicinal Chemistry
- * Virology
Background:
- * Coronavirus disease (COVID-19) is a global pandemic caused by SARS-CoV-2.
- * No approved antiviral drugs currently exist for COVID-19 treatment.
- * Natural compounds with known antiviral activities are being investigated for therapeutic potential.
Purpose of the Study:
- * To review the antiviral activities of polyphenols from Vitis amurensis against SARS-CoV-2.
- * To predict the inhibitory effects of these compounds on key viral enzymes using molecular docking.
- * To identify potential drug candidates for COVID-19 treatment.
Main Methods:
- * Literature review of antiviral activities of Vitis amurensis polyphenols.
- * Molecular docking simulations to assess binding affinity to SARS-CoV-2 Mpro and RdRp enzymes.
- * Pharmacokinetic analysis and drug-likeness assessment of identified compounds.
Main Results:
- * Polyphenols from Vitis amurensis demonstrated potential binding to SARS-CoV-2 Mpro and RdRp active sites.
- * Structure-activity relationships explained the observed inhibitory effects.
- * Caffeic acid, ferulic acid, quercetin, naringenin, and catechin exhibited drug-likeness characteristics.
Conclusions:
- * Five specific polyphenols from Vitis amurensis are promising candidates for COVID-19 drug development.
- * Further research and clinical trials are warranted to validate their therapeutic efficacy.
- * Natural products offer a viable avenue for discovering novel antiviral agents.
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