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A Cysteine Variant at an Allosteric Site Alters MIF Dynamics and Biological Function in Homo- and Heterotrimeric
Erin Skeens1, Georgios Pantouris2,3, Dilip Shah4
1Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, RI, United States.
Abstract:
Macrophage migration inhibitory factor (MIF) is an inflammatory protein with various non-overlapping functions. It is not only conserved in mammals, but it is found in parasites, fish, and plants. Human MIF is a homotrimer with an enzymatic cavity between two subunits with Pro1 as a catalytic base, activates the receptors CD74, CXCR2, and CXCR4, has functional interactions in the cytosol, and is reported to be a nuclease. There is a solvent channel down its 3-fold axis with a recently identified gating residue as an allosteric site important for regulating, to different extents, the enzymatic activity and CD74 binding and signaling. In this study we explore the consequence of converting the allosteric residue Tyr99 to cysteine (Y99C) and characterize its crystallographic structure, NMR dynamics, stability, CD74 function, and enzymatic activity. In addition to the homotrimeric variant, we develop strategies for expressing and purifying a heterotrimeric variant consisting of mixed wild type and Y99C for characterization of the allosteric site to provide more insight.
Insights
Investigating Macrophage Migration Inhibitory Factor (MIF) allosteric site mutations, this study characterizes the Tyr99Cys (Y99C) variant. The research provides insights into MIF
Area of Science:
- Biochemistry
- Molecular Biology
- Structural Biology
Background:
- Macrophage Migration Inhibitory Factor (MIF) is a conserved inflammatory protein with diverse functions.
- Human MIF functions as a homotrimer, possesses enzymatic activity, and interacts with receptors like CD74.
- A solvent channel and an allosteric gating residue regulate MIF's enzymatic activity and receptor binding.
Purpose of the Study:
- To investigate the functional consequences of mutating the allosteric residue Tyr99 to cysteine (Y99C) in human MIF.
- To characterize the structural, dynamic, and functional properties of the Y99C MIF variant.
- To explore the allosteric regulation of MIF by creating and analyzing heterotrimeric variants.
Main Methods:
- Site-directed mutagenesis to create the Y99C MIF variant.
- X-ray crystallography to determine the protein's structure.
- Nuclear Magnetic Resonance (NMR) spectroscopy to analyze protein dynamics.
- Biochemical assays to assess enzymatic activity and CD74 binding.
Main Results:
- The Y99C mutation was introduced, and the crystallographic structure of the variant was determined.
- NMR dynamics revealed changes associated with the allosteric site modification.
- Characterization of CD74 function and enzymatic activity of the Y99C variant was performed.
- Strategies for generating and purifying heterotrimeric MIF variants were developed.
Conclusions:
- The Y99C mutation impacts MIF's structural dynamics and allosteric regulation.
- Understanding the Y99C variant provides insights into MIF's catalytic mechanism and CD74 interactions.
- This research facilitates further studies on MIF allosteric modulation and therapeutic targeting.
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