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Related Experiment Video

Updated: Oct 1, 2025

Area-based Image Analysis Algorithm for Quantification of Macrophage-fibroblast Cocultures
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Area-based Image Analysis Algorithm for Quantification of Macrophage-fibroblast Cocultures

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Area-based Image Analysis Algorithm for Quantification of Macrophage-fibroblast Cocultures.

Tohn Borjigin1, Anuraag Boddupalli1, Millicent O Sullivan2

  • 1Department of Chemical and Biomolecular Engineering, University of Delaware.

Journal of Visualized Experiments : Jove
|March 7, 2022
PubMed
Summary

This study introduces a new image analysis algorithm for counting macrophages and fibroblasts in cocultures. Traditional methods rely on fluorescence or edge detection, which can be inaccurate. The new algorithm uses height differences from the background to distinguish cell types. It includes a primary algorithm for cell counting and a secondary algorithm to handle irregularities. An isolation algorithm helps analyze cocultures by excluding specific cell types. The method achieved high accuracy in monocultures and acceptable accuracy in cocultures. The approach does not require fluorescent labeling, making it suitable for tissue regeneration studies.

Keywords:
image analysis algorithmcell quantificationcoculture studiesmacrophage-fibroblast interactions

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Area of Science:

  • Cell biology imaging techniques
  • Tissue engineering
  • Computational biology

Background:

Cell counting is essential for many biological studies, but existing methods face limitations. Fluorescence-based approaches require specific labeling, which may not always be feasible. Edge detection methods often struggle with noise and inconsistent backgrounds. These challenges can reduce accuracy, especially in mixed cell cultures. Prior research has shown that fluorescence and transfection methods are widely used but have limitations. No prior work had resolved the problem of accurately distinguishing and counting cells in cocultures. This gap motivated the development of a new algorithm. The need for a reliable, non-labeling method is clear in tissue regeneration studies.

Purpose Of The Study:

The aim of this work was to develop an image analysis algorithm for counting and distinguishing macrophages and fibroblasts in cocultures. Macrophages and fibroblasts often colocalize during tissue regeneration. Accurate quantification is needed to study their interactions. Conventional methods are not reliable in mixed cultures. The researchers propose an area-based algorithm to address this issue. The method should work without fluorescent labeling. The study also sought to test the algorithm's accuracy in monocultures and cocultures. The goal was to provide a robust alternative to current techniques.

Main Methods:

The algorithm was implemented in MATLAB using an area-based approach. It differentiates cell types based on height differences from the background. A primary algorithm accounts for variations in cell size and density. An iterative secondary algorithm handles non-idealities in cell structures. Experimental data for each cell type were used to compute coverage parameters. An isolation algorithm was used to exclude specific cell types in cocultures. The algorithm was tested on monocultured and cocultured cells. Error margins were calculated to assess accuracy.

Main Results:

The algorithm achieved a 5% error margin in monocultured cells. It reached a 10% error margin in cocultured cells. The primary algorithm successfully accounted for cell size and structure variations. The secondary algorithm improved accuracy by handling non-idealities. The isolation algorithm effectively excluded specific cell types in cocultures. The method worked without fluorescent labeling or transfection. Results suggest the algorithm is suitable for high-density seeding conditions. The approach shows promise for tissue regeneration studies.

Conclusions:

The algorithm provides a reliable method for counting macrophages and fibroblasts in cocultures. It works without fluorescent labeling, which is a limitation of current methods. The method handles variations in cell structure and density. The 5% and 10% error margins suggest good accuracy for monocultures and cocultures. The isolation algorithm allows selective exclusion of cell types. This approach may improve studies on tissue regeneration. The results support the use of area-based methods in cell quantification. The algorithm could be adapted for other cell types in mixed cultures.

The algorithm uses height differences from the background to distinguish macrophages and fibroblasts in cocultures.

The secondary algorithm iteratively adjusts based on cell coverage parameters derived from experimental data.

Height differences allow the algorithm to distinguish macrophages and fibroblasts without fluorescence labeling.

The isolation algorithm selectively excludes specific cell types based on relative height differences.

The algorithm had a 5% error margin for monocultures and a 10% error margin for cocultures.

The authors propose that the algorithm provides a reliable, non-labeling method for cell quantification in tissue regeneration studies.