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Updated: Oct 1, 2025

Semi-Quantitative Analysis of Peptidoglycan by Liquid Chromatography Mass Spectrometry and Bioinformatics
Published on: October 13, 2020
Identification of antifreeze peptides in shrimp byproducts autolysate using peptidomics and bioinformatics
Kai Zhu1, Zhenxiao Zheng1, Zhiyuan Dai1
1The Joint Key Laboratory of Aquatic Products Processing of Zhejiang Province, 310012 Hangzhou, China; Institute of Seafood, Zhejiang Gongshang University, 310012 Hangzhou, China.
Abstract:
In the present study, a novel method based on peptidomics and bioinformatic was applied to identification and characterization of antifreeze peptides (AFPs) from shrimp byproducts autolysate (SBPA). According to the results of in silico prediction and high peptide structural inflexibility, DEYEESGPGIVH and EQICINFCNEK were picked as potential AFP-1 and AFP-2, respectively. The outcomes of DSC determination indicated that TH of synthesized AFP-1 and AFP-2 (10 mg/mL) were 1.37 °C and 1.57 °C, respectively. Besides, 0.1 %-3 % AFPs showed significant cryoprotection in shrimp muscle after 3 and 6 freeze-thaw cycles, evidenced by higher SSP content, Ca2+-ATPase activity, sulfhydryl content and lower surface hydrophobicity than control; while the higher concentration resulted in better protection against freeze induced denaturation. Both AFP-1&2 showed favorable hydrogen bonding affinity which facilitated ice binding and ice crystal growth inhibition. This work could provide new ideals for identification and characterization of AFPs.

