Related Experiment Video
Updated: Sep 30, 2025

09:37
Navigating MARRVEL, a Web-Based Tool that Integrates Human Genomics and Model Organism Genetics Information
Published on: August 15, 2019
9.9K
Tissue-specific genotype-phenotype correlations among USH2A-related disorders in the RUSH2A study
Robert B Hufnagel1, Wendi Liang2, Jacque L Duncan3
1Ophthalmic Genetics and Visual Function Branch, National Eye Institute, Bethesda, Maryland, USA.
Human Mutation
|March 10, 2022
Summary
USH2A gene variants impact Usher syndrome (USH2) and nonsyndromic retinitis pigmentosa (ARRP). Different USH2A alleles affect hearing and vision, showing a tissue-specific hierarchy with prognostic implications.
Area of Science:
- Genetics
- Ophthalmology
- Audiology
Background:
- Usher syndrome (USH2) and nonsyndromic autosomal recessive retinitis pigmentosa (ARRP) are genetic disorders affecting vision and hearing.
- USH2A gene variants are a common cause of these conditions.
- Understanding genotype-phenotype correlations is crucial for patient management and therapeutic development.
Purpose of the Study:
- To investigate genotype-phenotype correlations in individuals with USH2 or ARRP caused by USH2A variants.
- To determine the impact of different USH2A allelic types on visual, auditory, and olfactory functions.
- To identify potential prognostic indicators for disease progression and severity.
Main Methods:
- Clinical data and molecular diagnostics were collected from 127 participants in the RUSH2A study.
- Participants had either USH2 (n=80) or ARRP (n=47) due to USH2A variants.
- Genotype-phenotype relationships were analyzed for visual, auditory, and olfactory phenotypes.
Main Results:
- Truncating USH2A alleles were linked to USH2 and showed a dose-dependent effect on hearing loss severity in the USH2 subgroup, but not visual loss.
- Missense alleles in an interfibronectin domain acted as hypomorphic variants in ARRP, associated with later onset and better visual function.
- No genotype effect was observed on the severity of olfactory deficits.
Conclusions:
- A tissue-specific allelic hierarchy of USH2A variants influences disease presentation.
- These findings have significant prognostic implications for patient counseling and clinical trial endpoints.
- The study may guide clinical care and research for allelic disorders and pleiotropic phenotypes.
Related Concept Videos
Pleiotropy
41.3K
Pleiotropy is the phenomenon in which a single gene impacts multiple, seemingly unrelated phenotypic traits. For example, defects in the SOX10 gene cause Waardenburg Syndrome Type 4, or WS4, which can cause defects in pigmentation, hearing impairments, and an absence of intestinal contractions necessary for elimination. This diversity of phenotypes results from the expression pattern of SOX10 in early embryonic and fetal development. SOX10 is found in neural crest cells that form melanocytes,...
41.3K
Sex-linked Disorders
103.3K
Like autosomes, sex chromosomes contain a variety of genes necessary for normal body function. When a mutation in one of these genes results in biological deficits, the disorder is considered sex-linked.
103.3K
Incomplete Dominance
26.1K
Gregor Mendel's work (1822 - 1884) was primarily focused on pea plants. Through his initial experiments, he determined that every gene in a diploid cell has two variants called alleles inherited from each parent. He suggested that amongst these two alleles, one allele is dominant in character and the other recessive. The combination of alleles determines the phenotype of a gene in an organism.
26.1K
Genetic Lingo
106.0K
Overview
106.0K
Pedigree Analysis
85.8K
Overview
85.8K
Genome-wide Association Studies-GWAS
14.5K
Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
GWAS does not require the identification of the target gene involved in...
14.5K

