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KAT7-mediated CANX (calnexin) crotonylation regulates leucine-stimulated MTORC1 activity
Guokai Yan1,2,3, Xiuzhi Li1,2,3, Zilong Zheng1,2,3
1State Key Laboratory of Agricultural Microbiology, College of Animal Sciences and Technology, Huazhong Agricultural University, Wuhan, Hubei, China.
Abstract:
Amino acids play crucial roles in the MTOR (mechanistic target of rapamycin kinase) complex 1 (MTORC1) pathway. However, the underlying mechanisms are not fully understood. Here, we establish a cell-free system to mimic the activation of MTORC1, by which we identify CANX (calnexin) as an essential regulator for leucine-stimulated MTORC1 pathway. CANX translocates to lysosomes after leucine deprivation, and its loss of function renders either the MTORC1 activity or the lysosomal translocation of MTOR insensitive to leucine deprivation. We further find that CANX binds to LAMP2 (lysosomal associated membrane protein 2), and LAMP2 is required for leucine deprivation-induced CANX interaction with the Ragulator to inhibit Ragulator activity toward RRAG GTPases. Moreover, leucine deprivation promotes the lysine (K) 525 crotonylation of CANX, which is another essential condition for the lysosomal translocation of CANX. Finally, we find that KAT7 (lysine acetyltransferase 7) mediates the K525 crotonylation of CANX. Loss of KAT7 renders the MTORC1 insensitivity to leucine deprivation. Our findings provide new insights for the regulatory mechanism of the leucine-stimulated MTORC1 pathway.Abbreviations: CALR: calreticulin; CANX: calnexin; CLF: crude lysosome fraction; EIF4EBP1: eukaryotic translation initiation factor 4E binding protein 1; ER: endoplasmic reticulum; GST: glutathione S-transferase; HA: hemagglutinin; HEK293T: human embryonic kidney-293T; KAT7: lysine acetyltransferase 7; Kcr; lysine crotonylation; KO: knockout; LAMP2: lysosomal associated membrane protein 2; LAMTOR/Ragulator: late endosomal/lysosomal adaptor: MAPK and MTOR activator; MAP1LC3B: microtubule associated protein 1 light chain 3 beta; MTOR: mechanistic target of rapamycin kinase; PDI: protein disulfide isomerase; PTM: post-translational modification; RPS6KB1/p70S6 kinase 1: ribosomal protein S6 kinase B1; RPTOR: regulatory associated protein of MTOR complex 1; SESN2: sestrin 2; TMEM192: transmembrane protein 192; ULK1: unc-51 like autophagy activating kinase 1.
Insights
Calnexin (CANX) regulates the mechanistic target of rapamycin kinase complex 1 (MTORC1) pathway in response to leucine availability. This study identifies CANX’s lysosomal translocation and crotonylation as key steps in MTORC1 signaling.
Area of Science:
- Cell Biology
- Molecular Biology
- Biochemistry
Background:
- Amino acids are critical regulators of the MTORC1 pathway.
- The precise mechanisms linking amino acid availability to MTORC1 activation remain incompletely understood.
Purpose of the Study:
- To elucidate the role of calnexin (CANX) in leucine-mediated MTORC1 activation.
- To identify novel regulators and mechanisms governing MTORC1 signaling in response to nutrient cues.
Main Methods:
- Development of a cell-free system to mimic MTORC1 activation.
- Investigated protein localization, interactions, and post-translational modifications using techniques like knockout studies and biochemical assays.
Main Results:
- Identified calnexin (CANX) as a crucial regulator of leucine-stimulated MTORC1 signaling.
- Demonstrated that CANX translocates to lysosomes upon leucine deprivation and is essential for MTORC1 regulation.
- Uncovered that CANX interacts with lysosomal associated membrane protein 2 (LAMP2) and undergoes lysine crotonylation mediated by lysine acetyltransferase 7 (KAT7), both critical for its function.
Conclusions:
- Calnexin (CANX) acts as a key sensor and regulator in the leucine-MTORC1 pathway.
- Lysosomal translocation and lysine crotonylation of CANX are essential for nutrient-dependent MTORC1 signaling.
- This research provides novel insights into the intricate regulatory network of MTORC1.
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