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Updated: Sep 30, 2025

In Vivo Functional Study of Disease-associated Rare Human Variants Using Drosophila
Published on: August 20, 2019
SMAD1 Loss-of-Function Variant Responsible for Congenital Heart Disease
Zhi Wang1, Xiao-Hui Qiao1, Ying-Jia Xu2
1Department of Pediatric Internal Medicine, Ningbo Women & Children's Hospital, Ningbo 315031, China.
Insights
A new genetic cause for congenital heart disease (CHD) was identified. A SMAD1 gene variation disrupts heart development, offering insights for genetic risk assessment and prevention.
Area of Science:
- Cardiovascular Genetics
- Developmental Biology
- Human Genetics
Background:
- Congenital heart disease (CHD) is a major global health issue with a significant genetic component.
- Over 100 genes are linked to CHD, yet its genetic basis remains incompletely understood.
- Autosomal-dominant inheritance patterns are observed in some familial CHD cases.
Purpose of the Study:
- To identify novel genetic factors contributing to autosomal-dominant congenital heart disease (CHD).
- To investigate the functional impact of a newly identified SMAD1 gene variation in CHD pathogenesis.
- To explore the role of SMAD1 in the transcriptional regulation of known CHD-related genes.
Main Methods:
- Whole-exome sequencing was performed on a four-generation family with autosomal-dominant CHD.
- A heterozygous SMAD1 variant (c.264C>A; p.Tyr88*) was identified and validated using Sanger sequencing.
- Dual-luciferase reporter gene assays were conducted to assess SMAD1's transactivation activity.
Main Results:
- A truncating SMAD1 variation (Tyr88*) cosegregated with CHD in the affected family and was absent in controls.
- The Tyr88* SMAD1 mutation impaired the transactivation of TBX20 and NKX2.5.
- The mutation abolished the synergistic transcriptional activation between SMAD1 and MYOCD.
Conclusions:
- SMAD1 is identified as a novel gene associated with congenital heart disease (CHD).
- The findings elucidate a new genetic mechanism in CHD development involving SMAD1.
- This discovery has implications for genetic risk assessment and antenatal prevention strategies for families with CHD.
Abstract:
As the most common form of developmental malformation affecting the heart and endothoracic great vessels, congenital heart disease (CHD) confers substantial morbidity and mortality as well as socioeconomic burden on humans globally. Aggregating convincing evidence highlights the genetic origin of CHD, and damaging variations in over 100 genes have been implicated with CHD. Nevertheless, the genetic basis underpinning CHD remains largely elusive. In this study, via whole-exosome sequencing analysis of a four-generation family inflicted with autosomal-dominant CHD, a heterozygous SMAD1 variation, NM_005900.3: c.264C > A; p.(Tyr88∗), was detected and validated by Sanger sequencing analysis to be in cosegregation with CHD in the whole family. The truncating variation was not observed in 362 unrelated healthy volunteers employed as control persons. Dual-luciferase reporter gene assay in cultured COS7 cells demonstrated that Tyr88∗-mutant SMAD1 failed to transactivate the genes TBX20 and NKX2.5, two already well-established CHD-causative genes. Additionally, the variation nullified the synergistic transcriptional activation between SMAD1 and MYOCD, another recognized CHD-causative gene. These data indicate SMAD1 as a new gene responsible for CHD, which provides new insight into the genetic mechanism underlying CHD, suggesting certain significance for genetic risk assessment and precise antenatal prevention of the family members inflicted with CHD.
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