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Updated: Sep 30, 2025

Protein WISDOM: A Workbench for In silico De novo Design of BioMolecules
Published on: July 25, 2013
De novo Design of SARS-CoV-2 Main Protease Inhibitors
Christian Fischer1, Nynke A Vepřek1,2, Zisis Peitsinis1
1Department of Chemistry, New York University, 100 Washington Sq East, New York, NY, 10003, United States.
Abstract:
The COVID-19 pandemic prompted many scientists to investigate remedies against SARS-CoV-2 and related viruses that are likely to appear in the future. As the main protease of the virus, MPro, is highly conserved among coronaviruses, it has emerged as a prime target for developing inhibitors. Using a combination of virtual screening and molecular modeling, we identified small molecules that were easily accessible and could be quickly diversified. Biochemical assays confirmed a class of pyridones as low micromolar non-covalent inhibitors of the viral main protease.

