Related Experiment Video
Updated: Sep 30, 2025

Fecal Microbiota Transplantation via Colonoscopy for Recurrent C. difficile Infection
Published on: December 8, 2014
How to: Clostridioides difficile infection in children
Marcela Krutova1, Tim G J de Meij2, Fidelma Fitzpatrick3
1Department of Medical Microbiology, 2nd Faculty of Medicine, Charles University, Motol University Hospital, Prague, Czech Republic; European Society of Clinical Microbiology and Infectious Diseases (ESCMID) Study Group for Clostridioides difficile (ESGCD), Basel, Switzerland; European Society of Clinical Microbiology and Infectious Diseases (ESCMID) Study Group for Host and Microbiota Interaction (ESGHAMI).
Insights
Clostridioides difficile infection (CDI) management in children requires careful consideration of diagnostics and treatment. New data suggest fidaxomicin may be superior to vancomycin for sustained response in pediatric CDI cases.
Area of Science:
- Pediatric Infectious Diseases
- Microbiology
- Clinical Therapeutics
Background:
- Clostridioides difficile infections (CDI) affect children, though traditionally associated with older adults.
- Pediatric CDI diagnosis and management may differ from adult protocols.
Purpose of the Study:
- To review current literature on pediatric CDI.
- To provide guidance on CDI diagnostics and treatment in children.
Main Methods:
- Literature search of PubMed from January 2017 to July 2021.
Main Results:
- Pediatric CDI diagnostics should consider coinfections and differentiate colonization from infection (toxin detection is key).
- Fidaxomicin shows superiority over vancomycin for sustained clinical response in children.
- Metronidazole lacks supporting data for pediatric use; recurrent CDI may require adjusted treatments or fecal microbiota transplantation.
Conclusions:
- Pediatric CDI testing should account for colonization and coinfections.
- Current data support revising CDI treatment strategies in children.
Background:
Clostridioides difficile infections (CDI) are traditionally attributed to an older adult patient group but children can also be affected. Although the causative pathogen is the same in both populations, the management of CDI may differ.
Objectives:
To discuss the current literature on CDI in the paediatric population and to provide CDI diagnostics and treatment guidance.
Sources:
The literature was drawn from a search of PubMed from January 2017 to July 2021.
Content:
In the paediatric population, laboratory diagnostics for CDI should preferably be combined with laboratory diagnostics for other gastrointestinal pathogens. Coinfections of CDI are also possible. Though the detection of toxigenic C. difficile using a molecular assay may simply reflect colonisation rather than infection, detection of C. difficile free toxins A/B in faeces is much more indicative of true infection. CDI in children below 2 years of age and in the absence of risk factors is very difficult to diagnose and requires careful clinical judgement pending additional studies. Fidaxomicin has been shown to be superior to vancomycin with a sustained clinical response up to 30 days after the end of CDI treatment in children. Metronidazole is less effective than vancomycin in adults and there are no supporting data for its use in children. In recurrent CDI, treatment should be adjusted according to the drug or drug regimen used for the treatment of a previous episode(s). In multiple recurrent CDI, faecal microbiota transplantation can be effective.
Implications:
If CDI laboratory testing is indicated in children with diarrhoea, the likelihood of C. difficile colonisation and coinfection with other intestinal pathogens should be considered. The currently available data support a change in the treatment strategy of CDI in children.
Related Concept Videos
Immunodeficiency Diseases
There are three main causes of immunodeficiency...
Inflammatory Bowel Disease II: Crohn's Disease
Inflammatory bowel disease, commonly known as IBD, refers to a collection of disorders that lead to persistent inflammation of the gastrointestinal tract. The two types of IBD are ulcerative colitis, which impacts the colon, and Crohn's disease, which can involve any part of the gastrointestinal segment.
Crohn's disease
Crohn's disease is a chronic, systemic inflammatory bowel disease (IBD) that predominantly affects the gastrointestinal tract. It is marked by...
Transmission-based Precautions I: Contact, Enteric, and Droplets
Contact Precautions:
Contact precautions are the measures taken to prevent the transmission of infectious agents, especially epidemiologically important microorganisms such as MRSA or influenza, primarily transmitted through direct or indirect contact with an...
Drugs for Treatment of Crohn's Disease in IBD Using Immunomodulatory Agents
Drugs for Treatment of Crohn's Disease in IBD Using Glucocorticoids
Inflammatory Bowel Disease I: Ulcerative Colitis
Inflammatory bowel disease, or IBD, encompasses a group of disorders characterized by chronic inflammation or ulceration of the gastrointestinal tract.
Risk Factors
The exact cause of IBD remains unclear, although it is believed to be due to a mix of genetic, environmental, microbial, and immune factors. Genetic factors are significant in determining susceptibility to IBD, with family history being a critical risk factor. Individuals with a first-degree relative who has IBD are at...

