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A hybrid machine learning/deep learning COVID-19 severity predictive model from CT images and clinical data
Matteo Chieregato1, Fabio Frangiamore2,3, Mauro Morassi4
1Unit of Medical Physics, Fondazione Poliambulanza Istituto Ospedaliero, 25124, Brescia, Italy. matteo.chieregato@poliambulanza.it.
Scientific Reports
|March 15, 2022
Summary
This study presents a hybrid AI model to predict COVID-19 patient outcomes, classifying them into non-intensive care unit (non-ICU) or ICU admission/death categories. The model achieved high accuracy, aiding clinical decision support for severe disease prediction.
Area of Science:
- Artificial Intelligence in Medicine
- Medical Imaging Analysis
- Computational Pathology
Background:
- COVID-19 exhibits diverse clinical presentations and prognoses, necessitating accurate outcome prediction.
- Distinguishing between non-intensive care unit (non-ICU) and intensive care unit (ICU) outcomes is crucial for patient management.
- Early identification of patients at risk for severe COVID-19 is essential for resource allocation and timely intervention.
Purpose of the Study:
- To develop and validate a hybrid machine learning and deep learning model for classifying COVID-19 patient outcomes.
- To predict the likelihood of ICU admission or death in COVID-19 patients.
- To provide clinical decision support through probabilistic outcome scores and interpretable feature importance.
Main Methods:
- A hybrid model combining a 3D Convolutional Neural Network (CNN) for feature extraction from CT images with machine learning algorithms (Boruta, CatBoost) was developed.
- Patient data included baseline CT scans, laboratory results, and clinical information from 558 patients.
- SHAP (SHapley Additive exPlanations) values were utilized for feature selection and model interpretability.
Main Results:
- The hybrid model achieved a high Area Under the Curve (AUC) of 0.949 on the holdout test set.
- The model successfully classified patients into non-ICU and ICU (intensive care admission or death) outcome categories.
- Case-based SHAP interpretation provided insights into the importance of specific features for outcome prediction.
Conclusions:
- The developed hybrid AI model demonstrates significant potential for predicting COVID-19 patient outcomes.
- This tool can assist clinicians in making informed decisions regarding patient care and resource allocation.
- The integration of deep learning for image analysis and interpretable AI methods enhances clinical utility.

