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Updated: Sep 30, 2025

Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing
Published on: October 15, 2019
Stability of the gut microbiota in persons with paediatric-onset multiple sclerosis and related demyelinating
Geoffrey Liang1, Feng Zhu1, Ali I Mirza1
1Division of Neurology, Faculty of Medicine, The University of British Columbia, Vancouver, BC, Canada/The Djavad Mowafaghian Centre for Brain Health, Vancouver, BC, Canada.
Insights
Gut microbiota in paediatric multiple sclerosis (MS) and acquired demyelinating syndromes (ADS) is stable across samples. This stability supports using single stool samples for initial gut microbiome analysis in these conditions.
Area of Science:
- Microbiology
- Immunology
- Pediatric Neurology
Background:
- The gut microbiome plays a crucial role in immune system development and function.
- Alterations in gut microbiota have been implicated in various autoimmune and neurological disorders, including multiple sclerosis (MS).
- Understanding the stability of gut microbiota in pediatric-onset neurological conditions is essential for diagnostic and research approaches.
Purpose of the Study:
- To investigate the longitudinal stability of gut microbiota composition in children diagnosed with multiple sclerosis (MS) or monophasic-acquired demyelinating syndromes (monoADS).
- To determine if repeated stool sample analysis reveals significant changes in gut microbial communities over time in these pediatric populations.
- To assess the feasibility of using single stool samples for initial gut microbiome assessments in pediatric-onset MS and monoADS.
Main Methods:
- Analysis of stool samples from 36 participants (18 with MS, 18 with monoADS), with each participant providing at least two samples.
- DNA sequencing of stool-derived microbial communities.
- Statistical analysis of alpha and beta diversities, and genus-level taxa abundance, comparing repeated samples within individuals.
Main Results:
- No significant differences were observed in overall gut microbiota alpha or beta diversity between repeated stool samples within individuals (p > 0.09).
- A single genus, *Solobacterium*, showed a statistically significant change in abundance across repeated samples (p = 0.001).
- The mean age at first sample collection was 18.0 years for MS and 13.8 years for monoADS, with median intervals of 11.2 and 10.3 months between samples.
Conclusions:
- The gut microbiota composition in pediatric-onset MS and monoADS demonstrates considerable stability over time.
- The observed stability suggests that a single stool sample is a reliable method for initial gut microbiome profiling in these pediatric neurological conditions.
- These findings support the use of single-sample collection for initial gut microbiome assessments, simplifying research and diagnostic procedures.
Objective:
Examine if the gut microbiota composition changes across repeated samples in paediatric-onset multiple sclerosis (MS) or monophasic-acquired demyelinating syndromes (monoADS).
Methods:
A total of 36 individuals (18 MS/18 monoADS) with ⩾2 stool samples were included. Stool sample-derived DNA was sequenced. Alpha/beta diversities and genus-level taxa were analysed.
Results:
Mean ages at first sample procurement (MS/monoADS) = 18.0/13.8 years. Median time (months) between first/second samples = 11.2 and second/third = 10.3. Alpha/beta diversities did not differ between stool samples (p > 0.09), while one genus - Solobacterium did (p = 0.001).
Conclusions:
The gut microbiota composition in paediatric-onset MS and monoADS exhibited stability, suggesting that single stool sample procurement is a reasonable first approach.
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