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Published on: February 13, 2021
Bayesian optimisation for efficient parameter inference in a cardiac mechanics model of the left ventricle
Agnieszka Borowska1, Hao Gao1, Alan Lazarus1
1School of Mathematics and Statistics, University of Glasgow, Glasgow, UK.
Bayesian optimization speeds up parameter inference for heart models using clinical data. This efficient method improves computational times for left ventricle mechanics, outperforming current algorithms.
Area of Science:
- Computational mechanics
- Biomedical engineering
- Statistical modeling
Background:
- Cardio-mechanic models of the left ventricle are crucial for understanding heart function.
- Current parameter inference methods for these models are computationally expensive, hindering clinical application.
- The Holtzapfel-Ogden (HO) constitutive law is a complex model requiring numerical solutions.
Purpose of the Study:
- To develop a computationally efficient method for parameter inference in left ventricle cardio-mechanic models.
- To improve the clinical applicability of complex heart models, specifically those using the HO constitutive law.
- To integrate in vivo clinical data with ex vivo empirical laws for robust parameter estimation.
Main Methods:
- Utilized Bayesian optimization (BO), an efficient global optimization technique.
- Developed a surrogate model within the BO framework to approximate the black-box function of the HO model.
- Incorporated a penalty term based on ex vivo data to ensure realistic parameter estimates at high pressures.
- Applied the BO procedure to two case studies using real clinical data.
Main Results:
- The proposed Bayesian optimization procedure significantly reduced computational run times compared to traditional methods.
- The BO approach demonstrated superior performance in parameter inference for the HO constitutive law.
- The integrated penalty term ensured the reliability of parameter estimates even for unobservable high-pressure conditions.
Conclusions:
- Bayesian optimization offers an efficient and effective solution for parameter inference in complex cardio-mechanic models.
- This approach enhances the feasibility of using advanced heart models in clinical practice.
- The study validates the utility of BO for optimizing computationally intensive biomedical simulations.
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