Deubiquitinase Vulnerabilities Identified through Activity-Based Protein Profiling in Non-Small Cell Lung Cancer

ACS Chemical Biology
|March 21, 2022
PubMed

Insights

Researchers identified key deubiquitinases (DUBs) in non-small cell lung cancer (NSCLC) using activity-based protein profiling and genetic screens. This work highlights potential new drug targets for treating lung cancer subtypes.

Area of Science:

  • Oncology
  • Biochemistry
  • Proteomics

Background:

  • Deubiquitinases (DUBs) play crucial roles in cellular processes and are implicated in cancer development.
  • Identifying specific DUBs involved in non-small cell lung cancer (NSCLC) is essential for developing targeted therapies.

Purpose of the Study:

  • To prioritize deubiquitinases (DUBs) as potential anticancer targets in non-small cell lung cancer (NSCLC).
  • To identify DUBs that are overexpressed or essential for the viability of NSCLC cells.

Main Methods:

  • Combined activity-based protein profiling (ABPP) with mass spectrometry on NSCLC tumor tissues and cell lines.
  • Analyzed existing RNA interference (RNAi) and CRISPR screening data for lung cancer.
  • Utilized a COPS5/CSN5 inhibitor to investigate the role of COPS6 in lung cancer.

Main Results:

  • Identified 67 DUBs in NSCLC tissues.
  • Found 17 DUBs overexpressed in specific NSCLC histologies (adenocarcinoma or squamous cell).
  • Highlighted 12 DUBs affecting lung cancer cell viability in genetic screens, including COPS6.

Conclusions:

  • The study provides a valuable resource for understanding DUB signaling in lung cancer.
  • Nominates specific DUBs, such as COPS6, as druggable targets for NSCLC treatment.
  • Offers a strategic approach for prioritizing anticancer targets in specific cancer subtypes.

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