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Updated: Sep 29, 2025

Spatial and Temporal Control of Murine Melanoma Initiation from Mutant Melanocyte Stem Cells
Published on: June 7, 2019
HDAC11 activity contributes to MEK inhibitor escape in uveal melanoma
Sathya Neelature Sriramareddy1, Fernanda Faião-Flores1, Michael F Emmons1
1The Department of Tumor Biology, The Moffitt Cancer Center & Research Institute, 12902 Magnolia Drive, Tampa, FL, USA.
Abstract:
We previously demonstrated that pan-HDAC inhibitors could limit escape from MEK inhibitor (MEKi) therapy in uveal melanoma (UM) through suppression of AKT and YAP/TAZ signaling. Here, we focused on the role of specific HDACs in therapy adaptation. Class 2 UM displayed higher expression of HDACs 1, 2, and 3 than Class 1, whereas HDACs 6, 8, and 11 were uniformly expressed. Treatment of UM cells with MEKi led to modulation of multiple HDACs, with the strongest increases observed in HDAC11. RNA-seq analysis showed MEKi to decrease the expression of multiple HDAC11 target genes. Silencing of HDAC11 significantly reduced protein deacetylation, enhanced the apoptotic response to MEKi and reduced growth in long-term colony formation assays across multiple UM cell lines. Knockdown of HDAC11 led to decreased expression of TAZ in some UM cell lines, accompanied by decreased YAP/TAZ transcriptional activity and reduced expression of multiple YAP/TAZ target genes. Further studies showed this decrease in TAZ expression to be associated with increased LKB1 activation and modulation of glycolysis. In an in vivo model of uveal melanoma, silencing of HDAC11 limited the escape to MEKi therapy, an effect associated with reduced levels of Ki67 staining and increased cleaved caspase-3. We have demonstrated a novel role for adaptive HDAC11 activity in UM cells, that in some cases modulates YAP/TAZ signaling leading to MEKi escape.
Insights
Histone deacetylase 11 (HDAC11) promotes resistance to MEK inhibitor (MEKi) therapy in uveal melanoma (UM). Inhibiting HDAC11 enhances apoptosis and limits tumor growth, offering a new therapeutic strategy for UM.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Uveal melanoma (UM) often develops resistance to MEK inhibitor (MEKi) therapy.
- Pan-histone deacetylase (HDAC) inhibitors can limit MEKi resistance by suppressing AKT and YAP/TAZ signaling.
Purpose of the Study:
- To investigate the specific roles of individual HDACs in UM therapy adaptation.
- To determine the involvement of HDAC11 in MEKi resistance in UM.
Main Methods:
- Comparative analysis of HDAC expression in UM Class 1 and Class 2.
- Treatment of UM cells with MEKi and assessment of HDAC modulation.
- RNA-sequencing to identify HDAC11 target genes.
- HDAC11 silencing and evaluation of its effects on protein deacetylation, apoptosis, and cell growth.
- Analysis of YAP/TAZ signaling pathway and its target genes after HDAC11 knockdown.
- In vivo studies using a UM xenograft model.
Main Results:
- Class 2 UM showed higher expression of HDACs 1, 2, and 3 compared to Class 1.
- MEKi treatment increased HDAC11 expression in UM cells.
- Silencing HDAC11 reduced protein deacetylation, enhanced MEKi-induced apoptosis, and inhibited long-term colony formation.
- HDAC11 knockdown decreased TAZ expression, YAP/TAZ transcriptional activity, and target gene expression in some UM cell lines.
- HDAC11 silencing in vivo limited MEKi escape, evidenced by reduced Ki67 and increased cleaved caspase-3.
Conclusions:
- Adaptive HDAC11 activity plays a critical role in UM cells' resistance to MEKi therapy.
- HDAC11 modulates YAP/TAZ signaling, contributing to MEKi escape.
- Targeting HDAC11 represents a potential therapeutic strategy to overcome MEKi resistance in UM.
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