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Published on: August 20, 2019
De novo heterozygous variants in KIF5B cause kyphomelic dysplasia
Toshiyuki Itai1, Zheng Wang2, Gen Nishimura3
1Department of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, Japan.
Abstract:
Kyphomelic dysplasia is a heterogeneous group of skeletal dysplasias characterized by severe bowing of the limbs associated with other variable findings, such as narrow thorax and abnormal facies. We searched for the genetic etiology of this disorder. Four individuals diagnosed with kyphomelic dysplasia were enrolled. We performed whole-exome sequencing and evaluated the pathogenicity of the identified variants. All individuals had de novo heterozygous variants in KIF5B encoding kinesin-1 heavy chain: two with c.272A>G:p.(Lys91Arg), one with c.584C>A:p.(Thr195Lys), and the other with c.701G>T:p.(Gly234Val). All variants involved conserved amino acids in or close to the ATPase activity-related motifs in the catalytic motor domain of the KIF5B protein. All individuals had sharp angulation of the femora and humeri, distinctive facial features, and neonatal respiratory distress. Short stature was observed in three individuals. Three developed postnatal osteoporosis with subsequent fractures, two showed brachycephaly, and two were diagnosed with optic atrophy. Our findings suggest that heterozygous KIF5B deleterious variants cause a specific form of kyphomelic dysplasia. Furthermore, alterations in kinesins cause various symptoms known as kinesinopathies, and our findings also extend the phenotypic spectrum of kinesinopathies.
Insights
Genetic variants in KIF5B cause kyphomelic dysplasia, a skeletal disorder. This research identifies new KIF5B mutations, expanding the understanding of kinesinopathies and their associated symptoms.
Area of Science:
- Genetics and Molecular Biology
- Skeletal Dysplasias
- Human Disease Genetics
Background:
- Kyphomelic dysplasia is a rare skeletal disorder with limb bowing and variable features.
- The genetic causes of kyphomelic dysplasia remain largely unknown, necessitating further research.
- Kinesin motor proteins are crucial for intracellular transport, and their dysfunction can lead to various disorders (kinesinopathies).
Purpose of the Study:
- To identify the genetic basis of kyphomelic dysplasia in affected individuals.
- To characterize the phenotypic spectrum associated with identified genetic variants.
- To determine if KIF5B variants contribute to kyphomelic dysplasia and kinesinopathies.
Main Methods:
- Whole-exome sequencing was performed on four individuals diagnosed with kyphomelic dysplasia.
- Pathogenicity of identified variants in the KIF5B gene was evaluated.
- Clinical phenotypes were assessed and correlated with genetic findings.
Main Results:
- All four individuals presented with de novo heterozygous variants in KIF5B, encoding kinesin-1 heavy chain.
- The identified KIF5B variants were located in or near critical functional domains of the motor protein.
- Clinical manifestations included severe limb bowing, distinctive facial features, respiratory distress, short stature, osteoporosis, fractures, brachycephaly, and optic atrophy.
Conclusions:
- Deleterious heterozygous variants in KIF5B are a cause of a specific form of kyphomelic dysplasia.
- This study expands the known phenotypic spectrum of kinesinopathies.
- KIF5B mutations represent a significant genetic etiology for kyphomelic dysplasia.
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