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Published on: June 21, 2018
Genome-wide study of early and severe childhood asthma identifies interaction between CDHR3 and GSDMB
Anders U Eliasen1, Casper Emil T Pedersen2, Morten A Rasmussen3
1Copenhagen Prospective Studies on Asthma in Childhood (COPSAC), Herlev and Gentofte Hospital, University of Copenhagen, Copenhagen, Denmark; Department of Health Technology, Section for Bioinformatics, Technical University of Denmark, Kongens Lyngby, Denmark.
Insights
Genetic interactions between CDHR3 and GSDMB influence childhood asthma development, particularly severe exacerbations. This finding may lead to better treatments for early-onset asthma linked to viral infections.
Area of Science:
- Genetics
- Immunology
- Pediatrics
Background:
- Severe asthma exacerbations frequently hospitalize young children.
- Triggers are often respiratory infections, but host factors remain unclear.
- Current asthma treatments and prevention are insufficient.
Purpose of the Study:
- Identify genetic interactions linked to childhood asthma.
- Focus on early childhood asthma with severe exacerbations.
Main Methods:
- Analyzed single nucleotide polymorphism interactions in 1204 early childhood asthma cases and 5328 controls.
- Replicated findings in 3 independent populations.
- Investigated immune mechanisms in birth cohorts.
Main Results:
- Found replicated interaction between CDHR3 and GSDMB loci.
- CDHR3's effect depended on GSDMB genotype, especially in severe, early-onset disease.
- Immune analysis indicated increased IL-17A production post-viral stimulation.
Conclusions:
- CDHR3 and GSDMB interaction contributes to early childhood asthma.
- Mechanism may involve heightened IL-17A response to viral infections.
- Subtyping asthma is crucial for understanding genetic drivers.
Background:
Asthma with severe exacerbation is one of the most common causes of hospitalization among young children. Exacerbations are typically triggered by respiratory infections, but the host factors causing recurrent infections and exacerbations in some children are poorly understood. As a result, current treatment options and preventive measures are inadequate.
Objective:
We sought to identify genetic interaction associated with the development of childhood asthma.
Methods:
We performed an exhaustive search for pairwise interaction between genetic single nucleotide polymorphisms using 1204 cases of a specific phenotype of early childhood asthma with severe exacerbations in patients aged 2 to 6 years combined with 5328 nonasthmatic controls. Replication was attempted in 3 independent populations, and potential underlying immune mechanisms were investigated in the COPSAC2010 and COPSAC2000 birth cohorts.
Results:
We found evidence of interaction, including replication in independent populations, between the known childhood asthma loci CDHR3 and GSDMB. The effect of CDHR3 was dependent on the GSDMB genotype, and this interaction was more pronounced for severe and early onset of disease. Blood immune analyses suggested a mechanism related to increased IL-17A production after viral stimulation.
Conclusions:
We found evidence of interaction between CDHR3 and GSDMB in development of early childhood asthma, possibly related to increased IL-17A response to viral infections. This study demonstrates the importance of focusing on specific disease subtypes for understanding the genetic mechanisms of asthma.
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